WormBase Tree Display for Gene: WBGene00010725

WBGene00010725 SMap: S_parent: Sequence: K09E9
  Identity: Version: 3
    Name: CGC_name: ergi-3 Person_evidence: WBPerson141
      Sequence_name: K09E9.2
      Molecular_name: K09E9.2
        K09E9.2.1
        CE12012
        K09E9.2.2
      Other_name: erv-46 Person_evidence: WBPerson887
        CELE_K09E9.2 Accession_evidence: NDB BX284606
      Public_name: ergi-3
    DB_info: Database: AceView gene XQ234
        WormQTL gene WBGene00010725
        WormFlux gene WBGene00010725
        NDB locus_tag CELE_K09E9.2
        Panther gene CAEEL|WormBase=WBGene00010725|UniProtKB=Q93878
          family PTHR10984
        NCBI gene 181652
        RefSeq protein NM_001383686.2
        TREEFAM TREEFAM_ID TF300739
        TrEMBL UniProtAcc Q93878
        UniProt_GCRP UniProtAcc Q93878
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 15 Jun 2006 11:42:24 WBPerson2970 Name_change: CGC_name: erv-46
        3 04 Jan 2022 01:07:14 WBPerson1983 Name_change: CGC_name: ergi-3
                Other_name: erv-46
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ergi
    Allele (55)
    RNASeq_FPKM (74)
    GO_annotation: 00086833
      00086834
      00086835
      00086836
      00086837
      00086838
      00086839
      00086840
      00086841
      00086842
    Contained_in_operon: CEOPX156
    Ortholog (35)
    Paralog: WBGene00007668 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022416 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to be located in COPII-coated ER to Golgi transport vesicle; endoplasmic reticulum; and membrane. Expressed in alimentary muscle and vm1. Human ortholog(s) of this gene implicated in lung adenocarcinoma. Is an ortholog of human ERGIC3 (ERGIC and golgi 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:3910 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:15927)
  Molecular_info: Corresponding_CDS: K09E9.2
    Corresponding_transcript: K09E9.2.1
      K09E9.2.2
    Other_sequence (49)
    Associated_feature: WBsf654666
      WBsf671390
      WBsf238343
      WBsf238344
  Experimental_info: RNAi_result: WBRNAi00016924 Inferred_automatically: RNAi_primary
      WBRNAi00050436 Inferred_automatically: RNAi_primary
      WBRNAi00033370 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3910
      Expr1015546
      Expr1034694
      Expr1154141
      Expr2011373
      Expr2029609
    Drives_construct: WBCnstr00011743
      WBCnstr00031194
    Construct_product: WBCnstr00031194
    Microarray_results (18)
    Expression_cluster (117)
    Interaction (27)
  Map_info: Map: X Position: 22.9312
    Positive: Positive_clone: K09E9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027104
    WBPaper00038491
    WBPaper00055090
    WBPaper00062332
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene