WormBase Tree Display for Gene: WBGene00022416
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| WBGene00022416 | SMap | S_parent | Sequence | Y102A11A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ergi-1 | Person_evidence | WBPerson141 | |||||
| Sequence_name | Y102A11A.6 | ||||||||
| Molecular_name | Y102A11A.6 | ||||||||
| Y102A11A.6.1 | |||||||||
| CE27226 | |||||||||
| Other_name | CELE_Y102A11A.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ergi-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Jan 2022 01:04:11 | WBPerson1983 | Name_change | CGC_name | ergi-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ergi | ||||||||
| Allele (52) | |||||||||
| Strain | WBStrain00003019 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00089046 | ||||||||
| 00089047 | |||||||||
| 00089048 | |||||||||
| 00089049 | |||||||||
| 00089050 | |||||||||
| 00089051 | |||||||||
| 00089052 | |||||||||
| 00089053 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00007668 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00010725 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to be located in COPII-coated ER to Golgi transport vesicle; endoplasmic reticulum; and membrane. Human ortholog(s) of this gene implicated in neurogenic-type arthrogryposis multiplex congenita-2. Is an ortholog of human ERGIC1 (endoplasmic reticulum-golgi intermediate compartment 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0090124 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29205) | ||||
| Molecular_info | Corresponding_CDS | Y102A11A.6 | |||||||
| Corresponding_transcript | Y102A11A.6.1 | ||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf653718 | ||||||||
| WBsf670140 | |||||||||
| WBsf1022397 | |||||||||
| WBsf237045 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001393 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055120 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1275 | ||||||||
| Expr6869 | |||||||||
| Expr1017201 | |||||||||
| Expr1039899 | |||||||||
| Expr1158655 | |||||||||
| Expr2006921 | |||||||||
| Expr2025148 | |||||||||
| Drives_construct | WBCnstr00003519 | ||||||||
| WBCnstr00024240 | |||||||||
| Construct_product | WBCnstr00024240 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (111) | |||||||||
| Map_info | Map | X | Position | -17.0784 | |||||
| Positive | Positive_clone | Y102A11A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062332 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
