WormBase Tree Display for Gene: WBGene00010677
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| WBGene00010677 | SMap | S_parent | Sequence | K08F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gtbp-1 | Person_evidence | WBPerson1352 | |||||
| Sequence_name | K08F4.2 | ||||||||
| Molecular_name | K08F4.2 | ||||||||
| K08F4.2.1 | |||||||||
| CE37535 | |||||||||
| Other_name | CELE_K08F4.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | gtbp-1 | ||||||||
| DB_info | Database | AceView | gene | 4K892 | |||||
| WormQTL | gene | WBGene00010677 | |||||||
| WormFlux | gene | WBGene00010677 | |||||||
| NDB | locus_tag | CELE_K08F4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010677|UniProtKB=Q21351 | |||||||
| family | PTHR10693 | ||||||||
| NCBI | gene | 177880 | |||||||
| RefSeq | protein | NM_069441.9 | |||||||
| TREEFAM | TREEFAM_ID | TF325464 | |||||||
| TrEMBL | UniProtAcc | Q21351 | |||||||
| UniProt_GCRP | UniProtAcc | Q21351 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Mar 2014 14:12:13 | WBPerson2970 | Name_change | CGC_name | gtbp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gtbp | ||||||||
| Allele (55) | |||||||||
| Strain (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP4352 | ||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Predicted to enable mRNA binding activity. Located in cytoplasmic stress granule. Expressed widely. Is an ortholog of human G3BP1 (G3BP stress granule assembly factor 1) and G3BP2 (G3BP stress granule assembly factor 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K08F4.2 | |||||||
| Corresponding_CDS_history | K08F4.2:wp132 | ||||||||
| Corresponding_transcript | K08F4.2.1 | ||||||||
| Other_sequence | CR02321 | ||||||||
| CBC12393_1 | |||||||||
| CRC01774_1 | |||||||||
| Hbac_isotig01177 | |||||||||
| CR03720 | |||||||||
| CRC05090_1 | |||||||||
| Oden_isotig19389 | |||||||||
| CGC00291_1 | |||||||||
| CBC06784_1 | |||||||||
| CGC00644_1 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Expr14849 | ||||||||
| Expr16041 | |||||||||
| Expr16042 | |||||||||
| Expr1025331 | |||||||||
| Expr1034671 | |||||||||
| Expr1154021 | |||||||||
| Expr1200334 | |||||||||
| Expr1200335 | |||||||||
| Expr2012341 | |||||||||
| Expr2030578 | |||||||||
| Drives_construct | WBCnstr00031229 | ||||||||
| Construct_product | WBCnstr00031229 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (221) | |||||||||
| Map_info | Map | IV | Position | 4.53146 | |||||
| Positive | Positive_clone | K08F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
