WormBase Tree Display for Gene: WBGene00010558
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| WBGene00010558 | SMap | S_parent | Sequence | K04D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | ptrg-1 | Author_evidence | WBPerson555 | |||||
| Sequence_name | K04D7.4 | ||||||||
| Molecular_name | K04D7.4a | ||||||||
| K04D7.4a.1 | |||||||||
| CE40655 | |||||||||
| K04D7.4b | |||||||||
| CE44709 | |||||||||
| K04D7.4b.1 | |||||||||
| Other_name | ptp-4 | Author_evidence | WBPerson555 | ||||||
| CELE_K04D7.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | ptrg-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 17 Feb 2012 16:57:01 | WBPerson2970 | Name_change | CGC_name | ptp-4 | ||||
| 3 | 10 Jul 2023 23:47:10 | WBPerson51134 | Name_change | CGC_name | ptrg-1 | ||||
| Other_name | ptp-4 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ptrg | ||||||||
| Allele (133) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00040478 | ||||||||
| 00040479 | |||||||||
| 00040480 | |||||||||
| 00040481 | |||||||||
| 00040482 | |||||||||
| 00040483 | |||||||||
| 00040484 | |||||||||
| 00040485 | |||||||||
| 00117916 | |||||||||
| 00117917 | |||||||||
| Ortholog (31) | |||||||||
| Paralog (65) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein tyrosine phosphatase activity. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K04D7.4a | |||||||
| K04D7.4b | |||||||||
| Corresponding_CDS_history | K04D7.4:wp169 | ||||||||
| Corresponding_transcript | K04D7.4a.1 | ||||||||
| K04D7.4b.1 | |||||||||
| Other_sequence (11) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00049897 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001520 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016590 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019353 | ||||||||
| Expr1034608 | |||||||||
| Expr1153603 | |||||||||
| Expr2015151 | |||||||||
| Expr2033389 | |||||||||
| Drives_construct | WBCnstr00031326 | ||||||||
| Construct_product | WBCnstr00031326 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (202) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Map | IV | Position | 4.55839 | |||||
| Positive | Positive_clone | K04D7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060661 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
