WormBase Tree Display for Gene: WBGene00010539
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WBGene00010539 | SMap | S_parent | Sequence | K03H1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ttr-2 | |||||||
Sequence_name | K03H1.4 | ||||||||
Molecular_name | K03H1.4 | ||||||||
K03H1.4.1 | |||||||||
CE00475 | |||||||||
Other_name | CELE_K03H1.4 | Accession_evidence | NDB | BX284603 | |||||
Public_name | ttr-2 | ||||||||
DB_info | Database | AceView | gene | 3L17 | |||||
WormQTL | gene | WBGene00010539 | |||||||
WormFlux | gene | WBGene00010539 | |||||||
NDB | locus_tag | CELE_K03H1.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010539|UniProtKB=P34500 | |||||||
family | PTHR21700 | ||||||||
NCBI | gene | 176403 | |||||||
RefSeq | protein | NM_066802.7 | |||||||
SwissProt | UniProtAcc | P34500 | |||||||
TREEFAM | TREEFAM_ID | TF315773 | |||||||
UniProt_GCRP | UniProtAcc | P34500 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ttr | ||||||||
Allele (21) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00042703 | ||||||||
00042704 | |||||||||
00117898 | |||||||||
Ortholog (23) | |||||||||
Paralog (62) | |||||||||
Structured_description | Concise_description | K03H1.4 encodes a protein containing a predicted signal sequence followed by a transthyretin-like domain; the product of K03H1.4 belongs to a family of apparently nematode-specific proteins whose function is not yet known. | Paper_evidence | WBPaper00002969 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 04 Sep 2007 00:00:00 | ||||||||
Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00049853 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006712 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00046853 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016553 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033427 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000310 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram894 | ||||||||
Chronogram1301 | |||||||||
Chronogram1517 | |||||||||
Expr1012016 | |||||||||
Expr1034597 | |||||||||
Expr1153561 | |||||||||
Expr2017595 | |||||||||
Expr2035734 | |||||||||
Drives_construct | WBCnstr00031343 | ||||||||
Construct_product | WBCnstr00031343 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (232) | |||||||||
Interaction (171) | |||||||||
Map_info | Map | III | Position | 1.23456 | Error | 0.012844 | |||
Positive | Positive_clone | K03H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (2) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |