WormBase Tree Display for Gene: WBGene00010476
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WBGene00010476 | SMap | S_parent | Sequence | K01G5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | rnf-113 | Person_evidence | WBPerson338 | |||||
WBPerson250 | |||||||||
Sequence_name | K01G5.1 | ||||||||
Molecular_name | K01G5.1 | ||||||||
K01G5.1.1 | |||||||||
CE26718 | |||||||||
Other_name | 3K846 | Accession_evidence | EMBL | AF304126 | |||||
tag-331 | |||||||||
CELE_K01G5.1 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | rnf-113 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Apr 2005 11:55:18 | WBPerson2970 | Name_change | CGC_name | tag-331 | ||||
3 | 22 Aug 2008 17:05:48 | WBPerson2970 | Name_change | CGC_name | rnf-113 | ||||
Other_name | tag-331 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rnf | ||||||||
Allele (65) | |||||||||
Strain | WBStrain00036198 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Contained_in_operon | CEOP3701 | ||||||||
Ortholog (40) | |||||||||
Structured_description | Automated_description | Enables ubiquitin-protein transferase activity. Involved in protein ubiquitination. Located in nucleus. Expressed in head neurons; tail neurons; and ventral nerve cord. Human ortholog(s) of this gene implicated in nonphotosensitive trichothiodystrophy 5. Is an ortholog of human RNF113A (ring finger protein 113A). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0111868 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12974) | ||||
Molecular_info | Corresponding_CDS | K01G5.1 | |||||||
Corresponding_CDS_history | K01G5.1:wp40 | ||||||||
Corresponding_transcript | K01G5.1.1 | ||||||||
Other_sequence (32) | |||||||||
Associated_feature | WBsf978544 | ||||||||
WBsf994139 | |||||||||
WBsf1015849 | |||||||||
WBsf227511 | |||||||||
Transcription_factor | WBTranscriptionFactor001033 | ||||||||
Experimental_info | RNAi_result (14) | ||||||||
Expr_pattern | Expr7600 | ||||||||
Expr9485 | |||||||||
Expr1017609 | |||||||||
Expr1034572 | |||||||||
Expr1153358 | |||||||||
Expr2015381 | |||||||||
Expr2033615 | |||||||||
Drives_construct | WBCnstr00012745 | ||||||||
WBCnstr00037852 | |||||||||
Construct_product | WBCnstr00014050 | ||||||||
WBCnstr00037852 | |||||||||
Antibody | WBAntibody00002410 | ||||||||
Microarray_results (24) | |||||||||
Expression_cluster (94) | |||||||||
Interaction (60) | |||||||||
Map_info | Map | III | Position | 5.2994 | Error | 0.026825 | |||
Positive | Positive_clone | K01G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5157 | |||||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |