WormBase Tree Display for Gene: WBGene00010437
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WBGene00010437 | SMap | S_parent | Sequence | JC8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cox-11 | Person_evidence | WBPerson261 | |||||
Sequence_name | JC8.5 | ||||||||
Molecular_name | JC8.5a | ||||||||
JC8.5a.1 | |||||||||
CE38202 | |||||||||
JC8.5b | |||||||||
CE17988 | |||||||||
JC8.5b.1 | |||||||||
Other_name | CELE_JC8.5 | Accession_evidence | NDB | BX284604 | |||||
Public_name | cox-11 | ||||||||
DB_info | Database | AceView | gene | 4O11 | |||||
WormQTL | gene | WBGene00010437 | |||||||
WormFlux | gene | WBGene00010437 | |||||||
NDB | locus_tag | CELE_JC8.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010437|UniProtKB=Q95QD5 | |||||||
family | PTHR21320 | ||||||||
NCBI | gene | 186814 | |||||||
RefSeq | protein | NM_070146.7 | |||||||
NM_001306923.3 | |||||||||
TrEMBL | UniProtAcc | S6F574 | |||||||
Q95QD5 | |||||||||
UniProt_GCRP | UniProtAcc | Q95QD5 | |||||||
OMIM | gene | 603648 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 25 Jan 2013 14:30:54 | WBPerson2970 | Name_change | CGC_name | cox-11 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cox | ||||||||
Allele (71) | |||||||||
Strain | WBStrain00003460 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00088349 | ||||||||
00088350 | |||||||||
00117855 | |||||||||
Contained_in_operon | CEOP4536 | ||||||||
Ortholog (38) | |||||||||
Structured_description | Automated_description | Predicted to enable copper ion binding activity. Predicted to be located in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in cytochrome-c oxidase deficiency disease. Is an ortholog of human COX11 (cytochrome c oxidase copper chaperone COX11). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0070485 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2261) | ||||
Molecular_info | Corresponding_CDS | JC8.5a | |||||||
JC8.5b | |||||||||
Corresponding_CDS_history | JC8.5:wp140 | ||||||||
Corresponding_transcript | JC8.5a.1 | ||||||||
JC8.5b.1 | |||||||||
Other_sequence (42) | |||||||||
Associated_feature | WBsf229399 | ||||||||
WBsf229400 | |||||||||
Experimental_info | RNAi_result | WBRNAi00112816 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00008939 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00049573 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00025826 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033794 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071820 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112936 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112876 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00061684 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071488 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr6300 | ||||||||
Expr1011421 | |||||||||
Expr1034553 | |||||||||
Expr1153300 | |||||||||
Expr2010471 | |||||||||
Expr2028711 | |||||||||
Drives_construct | WBCnstr00003921 | ||||||||
WBCnstr00031417 | |||||||||
Construct_product | WBCnstr00031417 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (104) | |||||||||
Interaction (29) | |||||||||
Map_info | Map | IV | Position | 8.48644 | |||||
Positive | Positive_clone | JC8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |