WormBase Tree Display for Gene: WBGene00010437

WBGene00010437 SMap: S_parent: Sequence: JC8
  Identity: Version: 2
    Name: CGC_name: cox-11 Person_evidence: WBPerson261
      Sequence_name: JC8.5
      Molecular_name: JC8.5a
        JC8.5a.1
        CE38202
        JC8.5b
        CE17988
        JC8.5b.1
      Other_name: CELE_JC8.5 Accession_evidence: NDB BX284604
      Public_name: cox-11
    DB_info: Database: AceView gene 4O11
        WormQTL gene WBGene00010437
        WormFlux gene WBGene00010437
        NDB locus_tag CELE_JC8.5
        Panther gene CAEEL|WormBase=WBGene00010437|UniProtKB=Q95QD5
          family PTHR21320
        NCBI gene 186814
        RefSeq protein NM_070146.7
            NM_001306923.3
        TrEMBL UniProtAcc S6F574
            Q95QD5
        UniProt_GCRP UniProtAcc Q95QD5
        OMIM gene 603648
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 25 Jan 2013 14:30:54 WBPerson2970 Name_change: CGC_name: cox-11
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cox
    Allele (71)
    Strain: WBStrain00003460
    RNASeq_FPKM (74)
    GO_annotation: 00088349
      00088350
      00117855
    Contained_in_operon: CEOP4536
    Ortholog: WBGene00024990 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00072767 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00156886 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00126466 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00163180 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00224967 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g11570 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g11705 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15225 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13845 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6980 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g5289 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14426 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5575 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6470 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2383 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00007.g600 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-cox-11 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold589.g5062 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00041.g2223 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19454 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014519 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03067 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15176 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40141800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g12254 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00210361 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00211689 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00237519 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00106699 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258548 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302500 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000006053 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0051648 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050506-82 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:2261 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1917052 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:9174727 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable copper ion binding activity. Predicted to be located in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in cytochrome-c oxidase deficiency disease. Is an ortholog of human COX11 (cytochrome c oxidase copper chaperone COX11). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0070485 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2261)
  Molecular_info: Corresponding_CDS: JC8.5a
      JC8.5b
    Corresponding_CDS_history: JC8.5:wp140
    Corresponding_transcript: JC8.5a.1
      JC8.5b.1
    Other_sequence (42)
    Associated_feature: WBsf229399
      WBsf229400
  Experimental_info: RNAi_result: WBRNAi00112816 Inferred_automatically: RNAi_primary
      WBRNAi00008939 Inferred_automatically: RNAi_primary
      WBRNAi00049573 Inferred_automatically: RNAi_primary
      WBRNAi00025826 Inferred_automatically: RNAi_primary
      WBRNAi00033794 Inferred_automatically: RNAi_primary
      WBRNAi00071820 Inferred_automatically: RNAi_primary
      WBRNAi00112936 Inferred_automatically: RNAi_primary
      WBRNAi00112876 Inferred_automatically: RNAi_primary
      WBRNAi00061684 Inferred_automatically: RNAi_primary
      WBRNAi00071488 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr6300
      Expr1011421
      Expr1034553
      Expr1153300
      Expr2010471
      Expr2028711
    Drives_construct: WBCnstr00003921
      WBCnstr00031417
    Construct_product: WBCnstr00031417
    Microarray_results (20)
    Expression_cluster (104)
    Interaction (29)
  Map_info: Map: IV Position: 8.48644
    Positive: Positive_clone: JC8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene