WormBase Tree Display for Gene: WBGene00010424
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| WBGene00010424 | SMap | S_parent | Sequence | H36L18 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | lep-5 | Person_evidence | WBPerson2076 | ||||||
| Sequence_name | H36L18.2 | |||||||||
| Molecular_name | H36L18.2 | |||||||||
| Other_name | CELE_H36L18.2 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | lep-5 | |||||||||
| DB_info | Database | AceView | gene | XN272 | ||||||
| WormQTL | gene | WBGene00010424 | ||||||||
| WormFlux | gene | WBGene00010424 | ||||||||
| NDB | locus_tag | CELE_H36L18.2 | ||||||||
| NCBI | gene | 181411 | ||||||||
| RefSeq | protein | NR_149260.1 | ||||||||
| RNAcentral | URSid | URS0000B3BFE5 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 29 Jun 2017 15:12:02 | WBPerson1983 | Event | Changed_class | CDS | Transcript | ||||
| 3 | 30 Jun 2017 11:35:05 | WBPerson2970 | Name_change | CGC_name | lep-5 | |||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001641 | ||||||||
| Gene_class | lep | |||||||||
| Allele (28) | ||||||||||
| Strain | WBStrain00055034 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00271771 | Caenorhabditis brenneri | Person_evidence | WBPerson2076 | ||||||
| WBGene00271772 | Caenorhabditis remanei | Person_evidence | WBPerson2076 | |||||||
| WBGene00089290 | Caenorhabditis briggsae | Person_evidence | WBPerson2076 | |||||||
| WBGene00271773 | Caenorhabditis japonica | Person_evidence | WBPerson2076 | |||||||
| Structured_description | Automated_description | Expressed in several structures, including nervous system; pharynx; seam cell; somatic gonad; and vulva. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | H36L18.2:wp246 | ||||||||
| H36L18.2a:wp260 | ||||||||||
| H36L18.2b:wp260 | ||||||||||
| Corresponding_transcript | H36L18.2 | |||||||||
| Other_sequence | CJC01243_1 | |||||||||
| CBC06832_1 | ||||||||||
| Associated_feature | WBsf1007381 | |||||||||
| WBsf1024102 | ||||||||||
| Experimental_info | RNAi_result | WBRNAi00016345 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00049541 | Inferred_automatically | RNAi_primary | ||||||||
| WBRNAi00033479 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr14443 | |||||||||
| Expr14444 | ||||||||||
| Expr14445 | ||||||||||
| Expr1010797 | ||||||||||
| Expr1153264 | ||||||||||
| Expr2004605 | ||||||||||
| Expr2022830 | ||||||||||
| Drives_construct | WBCnstr00040877 | |||||||||
| Expression_cluster (184) | ||||||||||
| Interaction (66) | ||||||||||
| Map_info | Map | X | Position | 7.49403 | ||||||
| Positive | Positive_clone | H36L18 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00037385 | |||||||||
| WBPaper00047195 | ||||||||||
| WBPaper00052193 | ||||||||||
| WBPaper00052671 | ||||||||||
| WBPaper00056551 | ||||||||||
| WBPaper00057670 | ||||||||||
| WBPaper00058034 | ||||||||||
| WBPaper00063715 | ||||||||||
| WBPaper00065979 | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
