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WormBase Tree Display for Gene: WBGene00010424

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Name Class

WBGene00010424SMapS_parentSequenceH36L18
IdentityVersion3
NameCGC_namelep-5Person_evidenceWBPerson2076
Sequence_nameH36L18.2
Molecular_nameH36L18.2
Other_nameCELE_H36L18.2Accession_evidenceNDBBX284606
Public_namelep-5
DB_infoDatabaseAceViewgeneXN272
WormQTLgeneWBGene00010424
WormFluxgeneWBGene00010424
NDBlocus_tagCELE_H36L18.2
NCBIgene181411
RefSeqproteinNR_149260.1
RNAcentralURSidURS0000B3BFE5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
229 Jun 2017 15:12:02WBPerson1983EventChanged_classCDSTranscript
330 Jun 2017 11:35:05WBPerson2970Name_changeCGC_namelep-5
StatusLive
Gene_infoBiotypeSO:0001641
Gene_classlep
Allele (28)
StrainWBStrain00055034
RNASeq_FPKM (74)
OrthologWBGene00271771Caenorhabditis brenneriPerson_evidenceWBPerson2076
WBGene00271772Caenorhabditis remaneiPerson_evidenceWBPerson2076
WBGene00089290Caenorhabditis briggsaePerson_evidenceWBPerson2076
WBGene00271773Caenorhabditis japonicaPerson_evidenceWBPerson2076
Structured_descriptionAutomated_descriptionExpressed in several structures, including nervous system; pharynx; seam cell; somatic gonad; and vulva.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDS_historyH36L18.2:wp246
H36L18.2a:wp260
H36L18.2b:wp260
Corresponding_transcriptH36L18.2
Other_sequenceCJC01243_1
CBC06832_1
Associated_featureWBsf1007381
WBsf1024102
Experimental_infoRNAi_resultWBRNAi00016345Inferred_automaticallyRNAi_primary
WBRNAi00049541Inferred_automaticallyRNAi_primary
WBRNAi00033479Inferred_automaticallyRNAi_primary
Expr_patternExpr14443
Expr14444
Expr14445
Expr1010797
Expr1153264
Expr2004605
Expr2022830
Drives_constructWBCnstr00040877
Expression_cluster (184)
InteractionWBInteraction000136501
WBInteraction000140288
WBInteraction000200784
WBInteraction000211145
WBInteraction000219563
WBInteraction000227407
WBInteraction000233457
WBInteraction000252060
WBInteraction000256131
WBInteraction000265014
WBInteraction000269962
WBInteraction000290172
WBInteraction000292481
WBInteraction000297388
WBInteraction000298669
WBInteraction000302759
WBInteraction000308596
WBInteraction000308709
WBInteraction000317906
WBInteraction000328068
WBInteraction000328409
WBInteraction000330384
WBInteraction000338176
WBInteraction000342250
WBInteraction000344533
WBInteraction000353229
WBInteraction000360214
WBInteraction000361505
WBInteraction000363641
WBInteraction000372941
WBInteraction000374125
WBInteraction000374508
WBInteraction000380667
WBInteraction000386236
WBInteraction000387067
WBInteraction000393686
WBInteraction000398216
WBInteraction000406637
WBInteraction000407251
WBInteraction000408261
WBInteraction000408923
WBInteraction000409277
WBInteraction000411979
WBInteraction000412913
WBInteraction000413214
WBInteraction000413279
WBInteraction000415564
WBInteraction000425502
WBInteraction000427124
WBInteraction000430444
WBInteraction000433948
WBInteraction000439888
WBInteraction000444846
WBInteraction000450612
WBInteraction000450783
WBInteraction000450889
WBInteraction000451458
WBInteraction000451940
WBInteraction000453990
WBInteraction000456873
WBInteraction000457079
WBInteraction000457232
WBInteraction000460537
WBInteraction000548165
WBInteraction000560389
WBInteraction000560390
Map_infoMapXPosition7.49403
PositivePositive_cloneH36L18Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00037385
WBPaper00047195
WBPaper00052193
WBPaper00052671
WBPaper00056551
WBPaper00057670
WBPaper00058034
WBPaper00063715
WBPaper00065979
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene