WormBase Tree Display for Gene: WBGene00010405

WBGene00010405 SMap: S_parent: Sequence: H19N07
  Identity: Version: 2
    Name: CGC_name: erfa-3 Person_evidence: WBPerson124
      Sequence_name: H19N07.1
      Molecular_name: H19N07.1a
        H19N07.1a.1
        CE32460
        H19N07.1b
        CE45750
        H19N07.1b.1
      Other_name: phi-19 Person_evidence: WBPerson2582
        CELE_H19N07.1 Accession_evidence: NDB BX284605
      Public_name: erfa-3
    DB_info: Database: AceView gene 5L592
        WormQTL gene WBGene00010405
        WormFlux gene WBGene00010405
        NDB locus_tag CELE_H19N07.1
        Panther gene CAEEL|WormBase=WBGene00010405|UniProtKB=O45622
          family PTHR23115
        NCBI gene 179537
        RefSeq protein NM_001269363.4
            NM_001380755.1
        TREEFAM TREEFAM_ID TF300566
        TrEMBL UniProtAcc O45622
            E9P8A2
        UniProt_GCRP UniProtAcc O45622
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 30 Sep 2011 16:40:15 WBPerson2970 Name_change: CGC_name: erfa-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: erfa
    Allele (43)
    RNASeq_FPKM (74)
    GO_annotation (12)
    Contained_in_operon: CEOP5572
    Ortholog (41)
    Paralog (17)
    Structured_description: Automated_description: Predicted to enable GTPase activity and translation release factor activity. Predicted to be involved in translation. Predicted to be located in cytoplasm. Predicted to be part of translation release factor complex. Is an ortholog of human GSPT1 (G1 to S phase transition 1) and GSPT2 (G1 to S phase transition 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H19N07.1a
      H19N07.1b
    Corresponding_CDS_history: H19N07.1:wp90
    Corresponding_transcript: H19N07.1a.1
      H19N07.1b.1
    Other_sequence: JI476499.1
      EX559017.1
      CRC03251_1
      MI06616
      JI476117.1
      Oden_isotig07202
      Hbac_isotig02516
      FC540331.1
      FC548706.1
      DA05866
      HBC03152_1
      FC543614.1
      FC544213.1
      Tcir_isotig01178
      EY466196.1
      SC00263
      FC546606.1
      FC548704.1
      FC542901.1
      ES565324.1
      TMC01218_1
      CBC06656_1
      Name_isotig02382
      FC546989.1
      Acan_isotig07880
      ASC00998_1
      EY468585.1
      Oden_isotig15601
      Tcol_isotig02296
      FC819968.1
      GR10487
      Oden_isotig07205
      GR977429.1
      Oden_isotig07207
      EY465112.1
      FC543933.1
      FC553324.1
      SR04757
      XIC04973_1
      MHC02241_1
      MAC01631_1
      Dviv_isotig11730
      EX538514.1
      EX549546.1
      CR09537
      LSC00443_1
      Oden_isotig07208
      FC545288.1
      Dviv_isotig11729
      FC549300.1
      JI228108.1
      XI04473
      FC542446.1
      Tcol_isotig02298
      Oden_isotig07204
      MIC05934_1
      PT01434
      FC550722.1
      EX561014.1
      SS02145
      FC542644.1
      ACC22703_1
      Hbac_isotig03958
      MA02311
      FC542642.1
      MCC05302_1
      FC541242.1
      EX014653.1
      CJC00188_1
      PTC01844_1
      SSC02737_1
      CRC07632_1
      Oden_isotig15600
      EY472581.1
      GR19527
      Tcol_isotig13143
      TM01535
      JI169675.1
      FC545387.1
      DN557149.1
      FC541317.1
      DAC01053_1
      BXC05209_1
      FC553926.1
      DA02512
      Oden_isotig07203
      BXC05795_1
      FC548423.1
      MH00847
      BUC01973_1
      Tcol_isotig02299
      DAC01838_1
      Dviv_isotig11728
      GR19528
      MC04977
      FC814006.1
      EX562926.1
      FC548543.1
      EY461003.1
      CBC01033_1
      ACC34239_1
      FC541739.1
      EX912403.1
      EX556106.1
      FC547592.1
      JI182365.1
      Tcol_isotig02297
      EY469973.1
      SRC06196_1
      GRC03491_1
      Tcir_isotig01179
      CRC11691_1
      EY471047.1
      Oden_isotig07206
      Dviv_isotig11731
      ACC06054_1
      CR02607
      FC542965.1
      TSC08737_1
      CJC04333_1
      AS00686
    Associated_feature: WBsf653077
      WBsf1001273
      WBsf1020404
      WBsf234498
      WBsf234499
      WBsf234500
      WBsf234501
  Experimental_info: RNAi_result (15)
    Expr_pattern: Expr6277
      Expr1027088
      Expr1034537
      Expr1153161
      Expr2011357
      Expr2029593
    Drives_construct: WBCnstr00003449
      WBCnstr00031438
    Construct_product: WBCnstr00031438
      WBCnstr00041295
    Microarray_results (23)
    Expression_cluster (140)
    Interaction (153)
  Map_info: Map: V Position: 2.94886 Error: 0.000636
    Positive: Positive_clone: H19N07 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027281
    WBPaper00038491
    WBPaper00046427
    WBPaper00055090
    WBPaper00061547
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene