WormBase Tree Display for CDS: H19N07.1a
expand all nodes | collapse all nodes | view schema
| H19N07.1a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | H19N07 | ||
| Structure | Source_exons | 1 | 118 | ||
| 165 | 286 | ||||
| 758 | 1165 | ||||
| 1224 | 1967 | ||||
| 2417 | 2623 | ||||
| DB_info | Database | TrEMBL | UniProtAcc | O45622 | |
| UniProt | UniProtAcc | O45622 | |||
| UniProt_GCRP | UniProtAcc | O45622 | |||
| AlphaFold | entry | O45622 | |||
| NCBI_protein | GI_number | GI:25004981 | |||
| TREEFAM | TREEFAM_ID | TF300566 | |||
| Protein_id | CHROMOSOME_V | CAB07395 | 2 | ||
| DB_remark | ERFA-3 protein; contains similarity to Pfam domains PF00009 (Elongation factor Tu GTP binding domain), PF03143 (Elongation factor Tu C-terminal domain), PF03144 (Elongation factor Tu domain 2); contains similarity to Interpro domains IPR000795 (Translational (tr)-type GTP-binding domain), IPR004161 (Translation elongation factor EFTu-like, domain 2), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR009001 (Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal), IPR004160 (Translation elongation factor EFTu/EF1A, C-terminal), IPR009000 (Translation protein, beta-barrel domain superfamily) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | NDB | EC001703 | ||
| Visible (12) | |||||
| Associated_feature | WBsf005186 | ||||
| Method | curated |
