WormBase Tree Display for Gene: WBGene00010397
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| WBGene00010397 | SMap | S_parent | Sequence | H13N06 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | suox-1 | Person_evidence | WBPerson151 | |||||
| WBPerson14155 | |||||||||
| Sequence_name | H13N06.4 | ||||||||
| Molecular_name | H13N06.4a | ||||||||
| H13N06.4a.1 | |||||||||
| CE18814 | |||||||||
| H13N06.4b | |||||||||
| CE38383 | |||||||||
| H13N06.4c | |||||||||
| CE54309 | |||||||||
| H13N06.4b.1 | |||||||||
| H13N06.4b.2 | |||||||||
| H13N06.4c.1 | |||||||||
| Other_name | CELE_H13N06.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | suox-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 Aug 2011 09:11:34 | WBPerson2970 | Name_change | CGC_name | suox-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | suox | ||||||||
| Allele (41) | |||||||||
| Strain | WBStrain00007976 | ||||||||
| WBStrain00051220 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Contained_in_operon | CEOPX136 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Concise_description | suox-1 encodes a sulfite oxidase orthologous to human SUOX (SUOX; OMIM:602216), which when mutated leads to disease. | Curator_confirmed | WBPerson1843 | |||||
| WBPerson1823 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 20 Sep 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable heme binding activity; molybdopterin cofactor binding activity; and sulfite oxidase activity. Predicted to be involved in sulfur compound metabolic process. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in isolated sulfite oxidase deficiency. Is an ortholog of human SUOX (sulfite oxidase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111270 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11460) | ||||
| DOID:655 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11460) | ||||||
| Molecular_info | Corresponding_CDS | H13N06.4a | |||||||
| H13N06.4b | |||||||||
| H13N06.4c | |||||||||
| Corresponding_CDS_history | H13N06.4:wp141 | ||||||||
| Corresponding_transcript | H13N06.4a.1 | ||||||||
| H13N06.4b.1 | |||||||||
| H13N06.4b.2 | |||||||||
| H13N06.4c.1 | |||||||||
| Other_sequence (49) | |||||||||
| Associated_feature | WBsf236782 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00016262 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00027388 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001187 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049394 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025797 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033706 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025798 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026070 | ||||||||
| Expr1034536 | |||||||||
| Expr1153127 | |||||||||
| Expr2017123 | |||||||||
| Expr2035259 | |||||||||
| Drives_construct | WBCnstr00031443 | ||||||||
| Construct_product | WBCnstr00031443 | ||||||||
| WBCnstr00040858 | |||||||||
| WBCnstr00040859 | |||||||||
| WBCnstr00040860 | |||||||||
| WBCnstr00040861 | |||||||||
| WBCnstr00040862 | |||||||||
| Microarray_results | SMD_H13N06.4 | ||||||||
| 194119_at | |||||||||
| A_12_P109213 | |||||||||
| A_12_P132055 | |||||||||
| A_12_P132056 | |||||||||
| A_12_P132057 | |||||||||
| Aff_H13N06.4 | |||||||||
| GPL13394_WBGene00010397 | |||||||||
| GPL13914_H13N06.4 | |||||||||
| GPL14144_H13N06.4a_1458-1517_0.953_3_C | |||||||||
| GPL14144_H13N06.4a_1528-1587_0.957_2_B | |||||||||
| GPL14144_H13N06.4a_1588-1647_0.964_1_A | |||||||||
| GPL19516_CGZ0026308 | |||||||||
| GPL19516_CGZ0026309 | |||||||||
| GPL21109_H13N06.4a | |||||||||
| GPL21109_H13N06.4b | |||||||||
| GPL3518_CE18814 | |||||||||
| GPL8304_CE_WBGene00010397_A | |||||||||
| GPL8304_CE_WBGene00010397_B | |||||||||
| GPL8304_CE_WBGene00010397_C | |||||||||
| GPL8673_H13N06_4aP01036 | |||||||||
| GPL8673_H13N06_4aP01292 | |||||||||
| GPL8673_H13N06_4aP01501 | |||||||||
| GPL8673_H13N06_4bP00072 | |||||||||
| GPL8673_H13N06_4bP00277 | |||||||||
| GPL8673_H13N06_4bP00364 | |||||||||
| GPL9450_H13N06.4 | |||||||||
| cea2.p.148560 | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | X | Position | 22.7267 | |||||
| Positive | Positive_clone | H13N06 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040475 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056452 | |||||||||
| WBPaper00064697 | |||||||||
| WBPaper00065026 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
