WormBase Tree Display for Gene: WBGene00010380

WBGene00010380 SMap: S_parent: Sequence: H12D21
  Identity: Version: 2
    Name: CGC_name: mpst-2 Person_evidence: WBPerson1852
      Sequence_name: H12D21.4
      Molecular_name: H12D21.4
        H12D21.4.1
        CE52984
      Other_name: CELE_H12D21.4 Accession_evidence: NDB BX284605
      Public_name: mpst-2
    DB_info: Database: AceView gene 5P372
        WormQTL gene WBGene00010380
        WormFlux gene WBGene00010380
        NDB locus_tag CELE_H12D21.4
        Panther gene CAEEL|WormBase=WBGene00010380|UniProtKB=Q9XTX2
          family PTHR11364
        NCBI gene 186728
        RefSeq protein NM_074270.2
        TREEFAM TREEFAM_ID TF315133
        TrEMBL UniProtAcc Q9XTX2
        UniProt_GCRP UniProtAcc Q9XTX2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 Mar 2011 11:09:17 WBPerson2970 Name_change: CGC_name: mpst-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mpst
    Allele (41)
    RNASeq_FPKM (74)
    GO_annotation: 00101269
      00101270
      00101271
      00117802
    Ortholog: WBGene00064354 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00158759 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00132709 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00182875 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00027189 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00105777 Pristionchus pacificus From_analysis: Inparanoid_8
      CBOVI.g617 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13623 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1201 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g1203 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6353 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17772 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g1168 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17706 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g17200 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7915 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23697 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g23699 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_12473.g23772 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g20453 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g20472 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15881 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15883 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00325.g9439 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00325.g9441 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16688 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017419 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_017421 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06196 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10822 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_50346500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16638 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00276412 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277521 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00289398 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000005777 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
      ZFIN:ZDB-GENE-030131-9020 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            SonicParanoid
      HGNC:7223 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoInspector
      MGI:98852 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            SonicParanoid
      MGI:2179733 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
      RGD:3913 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            SonicParanoid
      RGD:620065 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            SonicParanoid
    Paralog: WBGene00008409 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011307 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00010383 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00022006 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00017387 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022007 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable thiosulfate sulfurtransferase activity. Predicted to be located in mitochondrion. Is an ortholog of human MPST (mercaptopyruvate sulfurtransferase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H12D21.4
    Corresponding_CDS_history: H12D21.4:wp270
    Corresponding_transcript: H12D21.4.1
    Other_sequence: ACC05844_1
      EX549157.1
      EX549106.1
    Associated_feature: WBsf1002178
      WBsf1020944
  Experimental_info: RNAi_result: WBRNAi00049376 Inferred_automatically: RNAi_primary
      WBRNAi00081658 Inferred_automatically: RNAi_primary
      WBRNAi00016245 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017457
      Expr1153108
      Expr2013676
      Expr2031910
    Drives_construct: WBCnstr00031454
    Construct_product: WBCnstr00031454
    Microarray_results (16)
    Expression_cluster (58)
    Interaction (29)
  Map_info: Map: V Position: 7.00012 Error: 0.003401
    Positive: Positive_clone: H12D21 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040475
    WBPaper00055090
    WBPaper00065080
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene