WormBase Tree Display for Gene: WBGene00010378
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| WBGene00010378 | SMap | S_parent | Sequence | H12D21 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | H12D21.2 | |||||||
| Molecular_name | H12D21.2a | ||||||||
| H12D21.2a.1 | |||||||||
| CE36698 | |||||||||
| H12D21.2b | |||||||||
| CE46606 | |||||||||
| H12D21.2b.1 | |||||||||
| Other_name | CELE_H12D21.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | H12D21.2 | ||||||||
| DB_info | Database | AceView | gene | 5P368 | |||||
| WormQTL | gene | WBGene00010378 | |||||||
| WormFlux | gene | WBGene00010378 | |||||||
| NDB | locus_tag | CELE_H12D21.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010378|UniProtKB=G5EGK3 | |||||||
| family | PTHR37977 | ||||||||
| NCBI | gene | 186726 | |||||||
| RefSeq | protein | NM_001392663.1 | |||||||
| NM_001269699.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF322975 | |||||||
| TrEMBL | UniProtAcc | G5EGK3 | |||||||
| H2L2K1 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EGK3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00009390 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00012174 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019507 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015192 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013890 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in AIN; arcade cell; germ line; neurons; and pharyngeal-intestinal valve cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq and microarray studies. Is affected by nine chemicals including methylmercuric chloride; Rifampin; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H12D21.2a | |||||||
| H12D21.2b | |||||||||
| Corresponding_CDS_history | H12D21.2:wp125 | ||||||||
| Corresponding_transcript | H12D21.2a.1 | ||||||||
| H12D21.2b.1 | |||||||||
| Associated_feature | WBsf1020941 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00016243 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049373 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022505 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038052 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049372 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015863 | ||||||||
| Expr1153106 | |||||||||
| Expr2004548 | |||||||||
| Expr2022774 | |||||||||
| Drives_construct | WBCnstr00031456 | ||||||||
| Construct_product | WBCnstr00031456 | ||||||||
| Microarray_results | SMD_H12D21.2 | ||||||||
| 182441_s_at | |||||||||
| Aff_H12D21.2 | |||||||||
| Expression_cluster (58) | |||||||||
| Interaction | WBInteraction000160209 | ||||||||
| WBInteraction000254898 | |||||||||
| WBInteraction000353984 | |||||||||
| WBInteraction000354073 | |||||||||
| WBInteraction000378338 | |||||||||
| Map_info | Positive | Positive_clone | H12D21 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.99768 | |||||||
| Method | Gene |
