WormBase Tree Display for Gene: WBGene00009390
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| WBGene00009390 | SMap | S_parent | Sequence | F35C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F35C5.1 | |||||||
| Molecular_name | F35C5.1 | ||||||||
| F35C5.1.1 | |||||||||
| CE35520 | |||||||||
| Other_name | CELE_F35C5.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F35C5.1 | ||||||||
| DB_info | Database | AceView | gene | 2N173 | |||||
| WormQTL | gene | WBGene00009390 | |||||||
| WormFlux | gene | WBGene00009390 | |||||||
| NDB | locus_tag | CELE_F35C5.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009390|UniProtKB=O45437 | |||||||
| family | PTHR37977 | ||||||||
| NCBI | gene | 185261 | |||||||
| RefSeq | protein | NM_064336.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322782 | |||||||
| TrEMBL | UniProtAcc | O45437 | |||||||
| UniProt_GCRP | UniProtAcc | O45437 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (15) | |||||||||
| Paralog | WBGene00012174 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010378 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015192 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019507 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in AVA; germ line; and hypodermis based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on microarray and RNA-seq studies. Is affected by five chemicals including methylmercuric chloride; manganese chloride; and Sodium Chloride based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F35C5.1 | |||||||
| Corresponding_CDS_history | F35C5.1:wp109 | ||||||||
| Corresponding_transcript | F35C5.1.1 | ||||||||
| Other_sequence | EL890141.1 | ||||||||
| EL887945.1 | |||||||||
| EL890642.1 | |||||||||
| EL890464.1 | |||||||||
| Associated_feature | WBsf990246 | ||||||||
| WBsf1013524 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031753 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014300 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046294 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011725 | ||||||||
| Expr1150184 | |||||||||
| Expr2003308 | |||||||||
| Expr2021521 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction | WBInteraction000317169 | ||||||||
| WBInteraction000380204 | |||||||||
| WBInteraction000503154 | |||||||||
| Map_info | Positive | Positive_clone | F35C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 12.1318 | |||||||
| Method | Gene |
