WormBase Tree Display for Gene: WBGene00010341

WBGene00010341 SMap: S_parent: Sequence: F59F5
  Identity: Version: 2
    Name: CGC_name: glo-3 Paper_evidence: WBPaper00032168
          Person_evidence: WBPerson253
      Sequence_name: F59F5.2
      Molecular_name: F59F5.2a
        F59F5.2a.1
        CE43105
        F59F5.2b
      Other_name: XL153 Accession_evidence: EMBL AF303254
        CELE_F59F5.2 Accession_evidence: NDB BX284606
      Public_name: glo-3
    DB_info: Database: AceView gene XL155
        WormQTL gene WBGene00010341
        WormFlux gene WBGene00010341
        NDB locus_tag CELE_F59F5.2
        NCBI gene 186637
        RefSeq protein NR_132549.1
            NM_001270179.3
        TrEMBL UniProtAcc G5EBW0
        RNAcentral URSid URS0000850849
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 15 Sep 2008 11:42:43 WBPerson2970 Event: Acquires_merge: WBGene00010346
              Name_change: CGC_name: glo-3
      Acquires_merge: WBGene00010346
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: glo
    Allele (57)
    Possibly_affected_by: WBVar02149561
    Strain: WBStrain00007855
      WBStrain00007856
    RNASeq_FPKM (74)
    GO_annotation: 00010368
      00010369
    Ortholog (25)
    Structured_description: Automated_description: Involved in gastrulation. Located in gut granule membrane. Expressed in intestine. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F59F5.2a
    Corresponding_CDS_history: F59F5.2:wp40
      F59F5.2b:wp248
    Corresponding_transcript: F59F5.2b
      F59F5.2a.1
    Associated_feature: WBsf663253
      WBsf716872
      WBsf978987
      WBsf236291
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr8336
      Expr1022301
      Expr1034516
      Expr1152967
      Expr2012107
      Expr2030343
    Drives_construct: WBCnstr00005355
      WBCnstr00007420
    Construct_product: WBCnstr00005355
      WBCnstr00007420
    Microarray_results (35)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_embryo_enriched
      WBPaper00042194:Tryptophan_upregulated
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smgl-1(RNAi)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044736:oscillating_dev_expression
      WBPaper00046496:Rifampicin_upregulated
      WBPaper00046509:htz-1(ok3099)_upregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049018:swsn-2.2(RNAi)_downregulated
      WBPaper00049334:CE_intestine_enriched
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049920:hyl-2(tm2031)_upregulated
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050080:rbr-2(tm3141)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:intestine_expressed
      WBPaper00051021:4-bromodiphenyl-ether_upregulated
      WBPaper00051039:intestine_enriched
      WBPaper00051257:Levamisole_upregulated
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053771:up_at_24h-NaCl
      WBPaper00054872:egl-9(sa307)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056073:R24_upregulated_nhr-86_dependent
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay1
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057068:ints-4(RNAi)_downregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058711:skn-1(lax188)_upregulated
      WBPaper00058711:wdr-5(ok1417)_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059609:malt-1_ilc-17.1_nfki-1_upregulated
      WBPaper00059839:S.maltophilia_regulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060084:cco-1(RNAi)_upregulated_N2
      WBPaper00060100:SiNP_upregulated_mRNA
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060871:M.humicola-infection_48h_regulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:HB115_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061340:PLM
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061527:172183_at-176110_at
      WBPaper00061527:dhs-28_22199-acs-14
      WBPaper00061530:nhr-49(e2144)_upregulated
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064156:lipl-4(overexpress)_upregulated
      WBPaper00064473:ets-4(rrr16)_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00064939:vit-5(RNAi)_upregulated
      WBPaper00065086:JU1400_N.ausubeli_regulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      cgc4489_group_8
      WBPaper00024393:strongly_regulated_dauer_genes
      WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
      WBPaper00025032:cluster_118
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00028789:PA14_vs_OP50_upregulated_4hr
      WBPaper00029437:dcr-1_upregulated
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036286:Pattern_I
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00038427:lin-54_embryo_changed
      WBPaper00040184:hcf-1down_sir-2.1down_daf-2down
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00040876:mir-35_upregulated
      WBPaper00040963:Q100_up
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041370:spg-7(RNAi)_upregulated
      WBPaper00042067:Cu2+_upregulated_WT
      WBPaper00044535:male_upregulated
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_ET
      [cgc5767]:expression_class_ET_max(122_min)
      [cgc5767]:expression_class_E_pi(122_min)
      [cgc5767]:expression_class_SE
      [cgc5767]:expression_class_SET
      [cgc5767]:expression_class_SE_pi(122_min)
    Interaction: WBInteraction000255886
      WBInteraction000307447
      WBInteraction000335957
      WBInteraction000559778
      WBInteraction000559779
  Map_info: Map: X Position: 2.22609 Error: 0.001376
    Positive: Positive_clone: F59F5 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5727
      Pos_neg_data: 10946
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene