WormBase Tree Display for Gene: WBGene00010336
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WBGene00010336 | SMap | S_parent | Sequence | F59F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | acox-1.6 | Person_evidence | WBPerson6498 | |||||
Sequence_name | F59F4.1 | ||||||||
Molecular_name | F59F4.1 | ||||||||
F59F4.1.1 | |||||||||
CE47936 | |||||||||
Other_name | acox-6 | Person_evidence | WBPerson6498 | ||||||
CELE_F59F4.1 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | acox-1.6 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 05 Jan 2017 11:44:00 | WBPerson2970 | Name_change | CGC_name | acox-1.6 | ||||
Other_name | acox-6 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | acox | ||||||||
Allele (109) | |||||||||
Strain | WBStrain00003136 | ||||||||
WBStrain00032393 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (21) | |||||||||
Ortholog (40) | |||||||||
Paralog (22) | |||||||||
Structured_description | Automated_description | Predicted to enable acyl-CoA oxidase activity; fatty acid binding activity; and flavin adenine dinucleotide binding activity. Predicted to be involved in fatty acid beta-oxidation using acyl-CoA oxidase and lipid homeostasis. Predicted to be located in peroxisome. Human ortholog(s) of this gene implicated in peroxisomal acyl-CoA oxidase deficiency. Is an ortholog of human ACOX1 (acyl-CoA oxidase 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0070516 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:119) | ||||
DOID:0050797 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:119) | ||||||
Molecular_info | Corresponding_CDS | F59F4.1 | |||||||
Corresponding_transcript | F59F4.1.1 | ||||||||
Other_sequence | CJC00234_1 | ||||||||
ACC09726_1 | |||||||||
MH05885 | |||||||||
BXC07001_1 | |||||||||
PPC00427_1 | |||||||||
EX013730.1 | |||||||||
FE910611.1 | |||||||||
FE910714.1 | |||||||||
CBC15284_1 | |||||||||
Dviv_isotig16355 | |||||||||
Hbac_isotig02166 | |||||||||
GRC04106_1 | |||||||||
JO469698.1 | |||||||||
AS10810 | |||||||||
Oden_isotig20791 | |||||||||
Tcir_isotig06650 | |||||||||
AYC02161_1 | |||||||||
EX534917.1 | |||||||||
AS14058 | |||||||||
FE912776.1 | |||||||||
ASC38376_1 | |||||||||
FF679036.1 | |||||||||
EX915732.1 | |||||||||
JO474127.1 | |||||||||
PP01480 | |||||||||
ASC09953_1 | |||||||||
HBC02652_1 | |||||||||
Tcol_isotig18444 | |||||||||
Tcol_isotig14636 | |||||||||
JI212049.1 | |||||||||
Tcir_isotig17802 | |||||||||
FG979158.1 | |||||||||
Acan_isotig20237 | |||||||||
Tcir_isotig25583 | |||||||||
ES739109.1 | |||||||||
HBC18639_1 | |||||||||
EX546237.1 | |||||||||
EX543710.1 | |||||||||
JI168200.1 | |||||||||
Tcir_isotig26408 | |||||||||
Tcir_isotig29217 | |||||||||
AE01455 | |||||||||
Tcir_isotig25690 | |||||||||
JI167818.1 | |||||||||
CJC02048_1 | |||||||||
EX546505.1 | |||||||||
EX536735.1 | |||||||||
Dviv_isotig16354 | |||||||||
MHC02257_1 | |||||||||
GR18918 | |||||||||
Name_isotig01679 | |||||||||
ASC02752_1 | |||||||||
ES743852.1 | |||||||||
Tcol_isotig14645 | |||||||||
PPC14785_1 | |||||||||
PPC16049_1 | |||||||||
PPC20189_1 | |||||||||
EX538511.1 | |||||||||
FF678083.1 | |||||||||
Acan_isotig09574 | |||||||||
Hbac_isotig03737 | |||||||||
GR18919 | |||||||||
Associated_feature | WBsf654674 | ||||||||
WBsf1008343 | |||||||||
WBsf1024658 | |||||||||
WBsf238356 | |||||||||
WBsf238357 | |||||||||
WBsf238358 | |||||||||
Experimental_info | RNAi_result | WBRNAi00102853 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049218 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102610 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033220 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076514 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016132 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102856 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092600 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1956 | ||||||||
Expr6267 | |||||||||
Expr1019069 | |||||||||
Expr1034512 | |||||||||
Expr1152962 | |||||||||
Expr2009170 | |||||||||
Expr2027408 | |||||||||
Drives_construct | WBCnstr00003619 | ||||||||
WBCnstr00031492 | |||||||||
Construct_product | WBCnstr00031492 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (172) | |||||||||
Interaction (58) | |||||||||
Map_info | Map | X | Position | 22.9622 | |||||
Positive | Positive_clone | F59F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |