WormBase Tree Display for Gene: WBGene00010149
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WBGene00010149 | SMap | S_parent | Sequence | F56D5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F56D5.5 | |||||||
Molecular_name | F56D5.5 | ||||||||
F56D5.5.1 | |||||||||
CE05961 | |||||||||
Other_name | CELE_F56D5.5 | Accession_evidence | NDB | BX284604 | |||||
Public_name | F56D5.5 | ||||||||
DB_info | Database | AceView | gene | 4K172 | |||||
WormQTL | gene | WBGene00010149 | |||||||
WormFlux | gene | WBGene00010149 | |||||||
NDB | locus_tag | CELE_F56D5.5 | |||||||
NCBI | gene | 177772 | |||||||
RefSeq | protein | NM_069259.5 | |||||||
TREEFAM | TREEFAM_ID | TF322971 | |||||||
TrEMBL | UniProtAcc | Q20885 | |||||||
UniProt_GCRP | UniProtAcc | Q20885 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (17) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00063821 | Caenorhabditis remanei | From_analysis | OMA | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00073810 | Caenorhabditis remanei | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00131096 | Caenorhabditis japonica | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
GCK72_013426 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Paralog | WBGene00012581 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in MC neuron; germ line; hypodermis; and rect_D based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by sixteen chemicals including methylmercury hydroxide; 1-methylnicotinamide; and rotenone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F56D5.5 | |||||||
Corresponding_transcript | F56D5.5.1 | ||||||||
Associated_feature | WBsf230565 | ||||||||
WBsf230566 | |||||||||
Experimental_info | RNAi_result | WBRNAi00078640 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032962 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015828 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078543 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015827 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048715 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048714 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062277 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022635 | ||||||||
Expr1034435 | |||||||||
Expr1152463 | |||||||||
Expr2004298 | |||||||||
Expr2022522 | |||||||||
Drives_construct | WBCnstr00031627 | ||||||||
Construct_product | WBCnstr00031627 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (126) | |||||||||
Interaction (98) | |||||||||
Map_info | Positive | Positive_clone | F56D5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 4.2373 | |||||||
Reference | WBPaper00065331 | ||||||||
Method | Gene |