WormBase Tree Display for Gene: WBGene00010125
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| WBGene00010125 | Evidence | Paper_evidence | WBPaper00005976 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F55G11 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | dod-22 | Person_evidence | WBPerson1157 | |||||
| Sequence_name | F55G11.5 | ||||||||
| Molecular_name | F55G11.5a | ||||||||
| F55G11.5a.1 | |||||||||
| CE18751 | |||||||||
| F55G11.5b | |||||||||
| CE44804 | |||||||||
| F55G11.5b.1 | |||||||||
| Other_name | CELE_F55G11.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dod-22 | ||||||||
| DB_info | Database | AceView | gene | 4N731 | |||||
| WormQTL | gene | WBGene00010125 | |||||||
| WormFlux | gene | WBGene00010125 | |||||||
| NDB | locus_tag | CELE_F55G11.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010125|UniProtKB=Q9XUE0 | |||||||
| family | PTHR47155 | ||||||||
| NCBI | gene | 178247 | |||||||
| RefSeq | protein | NM_001268760.2 | |||||||
| NM_001268761.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF316078 | |||||||
| TrEMBL | UniProtAcc | D5MCV0 | |||||||
| Q9XUE0 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XUE0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 25 Aug 2004 11:12:51 | WBPerson1971 | Name_change | CGC_name | dod-22 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dod | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00032269 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007684 | ||||||||
| 00101704 | |||||||||
| 00101705 | |||||||||
| 00101706 | |||||||||
| Ortholog (72) | |||||||||
| Paralog (35) | |||||||||
| Structured_description | Automated_description | Involved in defense response to Gram-negative bacterium and innate immune response. Expressed in head neurons and rectal gland cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F55G11.5a | |||||||
| F55G11.5b | |||||||||
| Corresponding_transcript | F55G11.5a.1 | ||||||||
| F55G11.5b.1 | |||||||||
| Other_sequence | CJC01390_1 | ||||||||
| Associated_feature | WBsf229354 | ||||||||
| WBsf229355 | |||||||||
| WBsf229356 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015752 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00075952 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032903 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092237 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00063217 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048553 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4726 | ||||||||
| Expr1026572 | |||||||||
| Expr1152337 | |||||||||
| Expr2011018 | |||||||||
| Expr2029255 | |||||||||
| Drives_construct | WBCnstr00012203 | ||||||||
| WBCnstr00031647 | |||||||||
| Construct_product | WBCnstr00012203 | ||||||||
| WBCnstr00014903 | |||||||||
| WBCnstr00031647 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (336) | |||||||||
| Interaction | WBInteraction000202560 | ||||||||
| WBInteraction000217594 | |||||||||
| WBInteraction000229119 | |||||||||
| WBInteraction000247667 | |||||||||
| WBInteraction000288541 | |||||||||
| WBInteraction000289053 | |||||||||
| WBInteraction000299437 | |||||||||
| WBInteraction000300578 | |||||||||
| WBInteraction000310118 | |||||||||
| WBInteraction000390816 | |||||||||
| WBInteraction000403608 | |||||||||
| WBInteraction000405981 | |||||||||
| WBInteraction000427493 | |||||||||
| WBInteraction000428461 | |||||||||
| WBInteraction000430566 | |||||||||
| WBInteraction000435096 | |||||||||
| WBInteraction000454639 | |||||||||
| WBInteraction000458058 | |||||||||
| WBInteraction000504929 | |||||||||
| WBInteraction000517589 | |||||||||
| WBInteraction000517592 | |||||||||
| WBInteraction000517593 | |||||||||
| WBInteraction000518621 | |||||||||
| WBInteraction000519497 | |||||||||
| WBInteraction000519501 | |||||||||
| WBInteraction000520521 | |||||||||
| WBInteraction000544068 | |||||||||
| WBInteraction000544071 | |||||||||
| WBInteraction000544072 | |||||||||
| WBInteraction000544073 | |||||||||
| WBInteraction000544078 | |||||||||
| WBInteraction000544080 | |||||||||
| WBInteraction000549476 | |||||||||
| WBInteraction000571165 | |||||||||
| Map_info | Map | IV | Position | 6.77332 | Error | 0.028651 | |||
| Positive | Positive_clone | F55G11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
