WormBase Tree Display for Gene: WBGene00010100
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| WBGene00010100 | SMap | S_parent | Sequence | F55C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F55C9.3 | |||||||
| Molecular_name | F55C9.3 | ||||||||
| F55C9.3.1 | |||||||||
| CE18735 | |||||||||
| F55C9.3.2 | |||||||||
| Other_name | CELE_F55C9.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F55C9.3 | ||||||||
| DB_info | Database | AceView | gene | 5T762 | |||||
| WormQTL | gene | WBGene00010100 | |||||||
| WormFlux | gene | WBGene00010100 | |||||||
| NDB | locus_tag | CELE_F55C9.3 | |||||||
| NCBI | gene | 186291 | |||||||
| RefSeq | protein | NM_075351.2 | |||||||
| TREEFAM | TREEFAM_ID | TF344158 | |||||||
| TrEMBL | UniProtAcc | Q9XUY9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUY9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar02124282 | ||||||||
| WBVar01499709 | |||||||||
| WBVar00273407 | |||||||||
| WBVar00273408 | |||||||||
| WBVar02124842 | |||||||||
| WBVar00273409 | |||||||||
| WBVar00273410 | |||||||||
| WBVar00273411 | |||||||||
| WBVar00273412 | |||||||||
| WBVar00226757 | |||||||||
| WBVar00226758 | |||||||||
| WBVar00226759 | |||||||||
| WBVar00226760 | |||||||||
| WBVar01099075 | |||||||||
| WBVar01099076 | |||||||||
| WBVar01099077 | |||||||||
| WBVar01099078 | |||||||||
| WBVar01099079 | |||||||||
| WBVar01099080 | |||||||||
| WBVar01099081 | |||||||||
| WBVar01099082 | |||||||||
| WBVar01099083 | |||||||||
| WBVar01499566 | |||||||||
| WBVar02052525 | |||||||||
| WBVar00068112 | |||||||||
| WBVar02122706 | |||||||||
| WBVar00068117 | |||||||||
| WBVar00068122 | |||||||||
| WBVar02082977 | |||||||||
| WBVar02108006 | |||||||||
| WBVar01499446 | |||||||||
| WBVar02151741 | |||||||||
| WBVar01523085 | |||||||||
| WBVar01498549 | |||||||||
| WBVar02088348 | |||||||||
| WBVar02088349 | |||||||||
| WBVar01499299 | |||||||||
| WBVar01978023 | |||||||||
| WBVar01978024 | |||||||||
| WBVar02114500 | |||||||||
| WBVar02091502 | |||||||||
| WBVar02121315 | |||||||||
| WBVar02091503 | |||||||||
| WBVar02121317 | |||||||||
| WBVar02121318 | |||||||||
| WBVar01498958 | |||||||||
| WBVar02124642 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrV_pilon.g17854 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00013500 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00013501 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; anterior hypodermis; and neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including hydrogen sulfide; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: PAZ domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F55C9.3 | |||||||
| Corresponding_transcript | F55C9.3.1 | ||||||||
| F55C9.3.2 | |||||||||
| Associated_feature | WBsf653561 | ||||||||
| WBsf669857 | |||||||||
| WBsf1003201 | |||||||||
| WBsf1003202 | |||||||||
| WBsf1021709 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048484 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019939 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018909 | ||||||||
| Expr1034411 | |||||||||
| Expr1152276 | |||||||||
| Expr2004221 | |||||||||
| Expr2022442 | |||||||||
| Drives_construct | WBCnstr00031668 | ||||||||
| Construct_product | WBCnstr00031668 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (140) | |||||||||
| Interaction (63) | |||||||||
| Map_info | Positive | Positive_clone | F55C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 20.8854 | |||||||
| Method | Gene |
