WormBase Tree Display for Gene: WBGene00010100
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WBGene00010100 | SMap | S_parent | Sequence | F55C9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F55C9.3 | |||||||
Molecular_name | F55C9.3 | ||||||||
F55C9.3.1 | |||||||||
CE18735 | |||||||||
F55C9.3.2 | |||||||||
Other_name | CELE_F55C9.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | F55C9.3 | ||||||||
DB_info | Database | AceView | gene | 5T762 | |||||
WormQTL | gene | WBGene00010100 | |||||||
WormFlux | gene | WBGene00010100 | |||||||
NDB | locus_tag | CELE_F55C9.3 | |||||||
NCBI | gene | 186291 | |||||||
RefSeq | protein | NM_075351.2 | |||||||
TREEFAM | TREEFAM_ID | TF344158 | |||||||
TrEMBL | UniProtAcc | Q9XUY9 | |||||||
UniProt_GCRP | UniProtAcc | Q9XUY9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (47) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | chrV_pilon.g17854 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog | WBGene00013500 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00013501 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; anterior hypodermis; and neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including hydrogen sulfide; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: PAZ domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F55C9.3 | |||||||
Corresponding_transcript | F55C9.3.1 | ||||||||
F55C9.3.2 | |||||||||
Associated_feature | WBsf653561 | ||||||||
WBsf669857 | |||||||||
WBsf1003201 | |||||||||
WBsf1003202 | |||||||||
WBsf1021709 | |||||||||
Experimental_info | RNAi_result | WBRNAi00048484 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019939 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018909 | ||||||||
Expr1034411 | |||||||||
Expr1152276 | |||||||||
Expr2004221 | |||||||||
Expr2022442 | |||||||||
Drives_construct | WBCnstr00031668 | ||||||||
Construct_product | WBCnstr00031668 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (140) | |||||||||
Interaction (63) | |||||||||
Map_info | Positive | Positive_clone | F55C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 20.8854 | |||||||
Method | Gene |