WormBase Tree Display for Gene: WBGene00010043
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| WBGene00010043 | SMap | S_parent | Sequence | F54C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54C9.7 | |||||||
| Molecular_name | F54C9.7 | ||||||||
| F54C9.7.1 | |||||||||
| CE02257 | |||||||||
| Other_name | CELE_F54C9.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F54C9.7 | ||||||||
| DB_info | Database | AceView | gene | 2I865 | |||||
| WormQTL | gene | WBGene00010043 | |||||||
| WormFlux | gene | WBGene00010043 | |||||||
| NDB | locus_tag | CELE_F54C9.7 | |||||||
| NCBI | gene | 186225 | |||||||
| RefSeq | protein | NM_063412.3 | |||||||
| TrEMBL | UniProtAcc | Q20756 | |||||||
| UniProt_GCRP | UniProtAcc | Q20756 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069016 | ||||||||
| 00069017 | |||||||||
| 00069018 | |||||||||
| 00069019 | |||||||||
| Ortholog (18) | |||||||||
| Structured_description | Concise_description | F54C9.7 encodes a novel, predicted transmembrane protein conserved amongst nematodes; loss of F54C9.7 activity via RNAi results in decreased intestinal uptake of a fluorescent dipeptide, increased fat droplet size, and increased fatty acid uptake, a phenotype that mimics loss of PEPT-1 peptide transporter activity; F54C9.7 expression is reportedly seen in the intestine, pharynx (including the pharyngeal muscle cells m3-m7), head hypodermal cells, and anterior body hypodermis with occasional weak staining seen in the excretory cell and the posterior canals. | Paper_evidence | WBPaper00040287 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 21 Oct 2011 00:00:00 | ||||||||
| Automated_description | Involved in negative regulation of fatty acid transport; regulation of lipid storage; and regulation of peptide transport. Predicted to be located in membrane. Expressed in excretory cell; hypodermis; intestinal cell; and pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54C9.7 | |||||||
| Corresponding_transcript | F54C9.7.1 | ||||||||
| Associated_feature | WBsf221774 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00090581 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048275 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015592 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032768 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr126 | ||||||||
| Expr1013635 | |||||||||
| Expr1152077 | |||||||||
| Expr2004129 | |||||||||
| Expr2022353 | |||||||||
| Drives_construct | WBCnstr00031713 | ||||||||
| Construct_product | WBCnstr00031713 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Positive | Positive_clone | F54C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.819145 | |||||||
| Reference | WBPaper00040287 | ||||||||
| Method | Gene |
