WormBase Tree Display for Gene: WBGene00009918
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| WBGene00009918 | SMap | S_parent | Sequence | F52A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gcsh-2 | Person_evidence | WBPerson151 | |||||
| Sequence_name | F52A8.5 | ||||||||
| Molecular_name | F52A8.5 | ||||||||
| F52A8.5.1 | |||||||||
| CE05912 | |||||||||
| F52A8.5.2 | |||||||||
| Other_name | CELE_F52A8.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | gcsh-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Nov 2016 11:06:22 | WBPerson2970 | Name_change | CGC_name | gcsh-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcsh | ||||||||
| Allele (16) | |||||||||
| Strain | WBStrain00049351 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00068603 | ||||||||
| 00068604 | |||||||||
| 00068605 | |||||||||
| 00068606 | |||||||||
| 00068607 | |||||||||
| 00068608 | |||||||||
| 00068609 | |||||||||
| 00068610 | |||||||||
| 00117473 | |||||||||
| 00117474 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00008354 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | F52A8.5 is orthologous to the human gene GLYCINE CLEAVAGE SYSTEM PROTEIN H (GCSH; OMIM:238330), which when mutated leads to glycine encephalopathy. | Paper_evidence | WBPaper00004424 | |||||
| Curator_confirmed | WBPerson1823 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in glycine decarboxylation via glycine cleavage system. Predicted to be located in mitochondrion. Predicted to be part of glycine cleavage complex. Human ortholog(s) of this gene implicated in amino acid metabolic disorder and multiple mitochondrial dysfunctions syndrome. Is an ortholog of human GCSH (glycine cleavage system protein H). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9252 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4208) | ||||
| DOID:0070330 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4208) | ||||||
| Molecular_info | Corresponding_CDS | F52A8.5 | |||||||
| Corresponding_transcript | F52A8.5.1 | ||||||||
| F52A8.5.2 | |||||||||
| Other_sequence (39) | |||||||||
| Associated_feature | WBsf649311 | ||||||||
| WBsf649312 | |||||||||
| WBsf984158 | |||||||||
| WBsf1010073 | |||||||||
| WBsf219747 | |||||||||
| WBsf219748 | |||||||||
| WBsf219749 | |||||||||
| WBsf219750 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003732 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032576 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032575 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116957 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00084361 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001643 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047909 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106964 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014754 | ||||||||
| Expr1034318 | |||||||||
| Expr1151738 | |||||||||
| Expr2011974 | |||||||||
| Expr2030211 | |||||||||
| Drives_construct | WBCnstr00031817 | ||||||||
| Construct_product | WBCnstr00031817 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction (45) | |||||||||
| Map_info | Positive | Positive_clone | F52A8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 1.9367 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
