WormBase Tree Display for Gene: WBGene00008354
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| WBGene00008354 | SMap | S_parent | Sequence | D1025 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gcsh-1 | Person_evidence | WBPerson1711 | |||||
| Sequence_name | D1025.2 | ||||||||
| Molecular_name | D1025.2 | ||||||||
| D1025.2.1 | |||||||||
| CE17610 | |||||||||
| Other_name | CELE_D1025.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | gcsh-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Apr 2011 10:05:24 | WBPerson2970 | Name_change | CGC_name | gcsh-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcsh | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00037035 | ||||||||
| 00037036 | |||||||||
| 00037037 | |||||||||
| 00037038 | |||||||||
| 00037039 | |||||||||
| 00037040 | |||||||||
| 00037041 | |||||||||
| 00037042 | |||||||||
| 00116273 | |||||||||
| 00116274 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00009918 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in glycine decarboxylation via glycine cleavage system. Predicted to be located in mitochondrion. Predicted to be part of glycine cleavage complex. Human ortholog(s) of this gene implicated in amino acid metabolic disorder and multiple mitochondrial dysfunctions syndrome. Is an ortholog of human GCSH (glycine cleavage system protein H). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9252 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4208) | ||||
| DOID:0070330 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4208) | ||||||
| Molecular_info | Corresponding_CDS | D1025.2 | |||||||
| Corresponding_transcript | D1025.2.1 | ||||||||
| Other_sequence | SS00383 | ||||||||
| SSC06518_1 | |||||||||
| FD517462.1 | |||||||||
| CSC01317_1 | |||||||||
| CBC05696_1 | |||||||||
| CRC05162_1 | |||||||||
| Dviv_isotig16326 | |||||||||
| CR01304 | |||||||||
| Associated_feature | WBsf654575 | ||||||||
| WBsf1007927 | |||||||||
| WBsf1024413 | |||||||||
| WBsf238239 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012511 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043358 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030328 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022014 | ||||||||
| Expr1033619 | |||||||||
| Expr1147340 | |||||||||
| Expr2011973 | |||||||||
| Expr2030210 | |||||||||
| Drives_construct | WBCnstr00033034 | ||||||||
| Construct_product | WBCnstr00033034 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (245) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Map | X | Position | 16.7278 | |||||
| Positive | Positive_clone | D1025 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040386 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061938 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
