WormBase Tree Display for Gene: WBGene00009887

WBGene00009887 SMap: S_parent: Sequence: F49E2
  Identity: Version: 2
    Name: CGC_name: glb-17 Paper_evidence: WBPaper00031066
          Person_evidence: WBPerson1540
      Sequence_name: F49E2.4
      Molecular_name: F49E2.4a
        F49E2.4a.1
        CE01012
        F49E2.4b
        CE44201
        F49E2.4a.2
        F49E2.4b.1
        F49E2.4b.2
      Other_name: CELE_F49E2.4 Accession_evidence: NDB BX284606
      Public_name: glb-17
    DB_info: Database: AceView gene XK192
        WormQTL gene WBGene00009887
        WormFlux gene WBGene00009887
        NDB locus_tag CELE_F49E2.4
        NCBI gene 186039
        RefSeq protein NM_001270149.4
            NM_001270150.3
        TREEFAM TREEFAM_ID TF321698
        TrEMBL UniProtAcc D0VWM4
            Q20623
        UniProt_GCRP UniProtAcc D0VWM4
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Oct 2007 15:16:42 WBPerson2970 Name_change: CGC_name: glb-17
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: glb
    Allele: WBVar01825256
      WBVar01551138
      WBVar01551139
      WBVar01551140
      WBVar01551141
      WBVar01619777
      WBVar01619778
      WBVar01619779
      WBVar01619780
      WBVar01619781
      WBVar01500130
      WBVar01500131
      WBVar00257519
      WBVar01499963
      WBVar00513198
      WBVar01570941
      WBVar00513199
      WBVar00513200
      WBVar00513201
      WBVar00513202
      WBVar00513203
      WBVar00513204
      WBVar00513205
      WBVar02139880
      WBVar01602108
      WBVar01175093
      WBVar01816667
      WBVar01175094
      WBVar01816668
      WBVar01175095
      WBVar01816669
      WBVar01175096
      WBVar01175097
      WBVar01175098
      WBVar02065690
      WBVar01175099
      WBVar02065691
      WBVar01175100
      WBVar01175101
      WBVar01175102
      WBVar01175103
      WBVar01175104
      WBVar01175105
      WBVar01175106
      WBVar01175107
      WBVar01175108
      WBVar01175109
      WBVar01887641
      WBVar01499642
      WBVar01887642
      WBVar01175110
      WBVar01887643
      WBVar01897701
      WBVar00258148
      WBVar01987490
      WBVar01498960
      WBVar01500067
    RNASeq_FPKM (74)
    GO_annotation: 00117448
      00117449
    Ortholog: WBGene00036145 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00059766 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00156007 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00095472 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00123919 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g3977 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12503 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1442 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21559 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9436 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g15349 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7103 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5456 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g10606 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4748 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00044.g2379 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-glb-17 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13468 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00008.g593 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_02216 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023324 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07527 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g8673 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0056600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19763 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00263725 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00011296 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007741 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008996 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00077763 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: glb-17 encodes a globin with no obvious function in mass RNAi assays. Paper_evidence: WBPaper00025067
            WBPaper00031066
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Dec 2007 00:00:00
      Automated_description: Predicted to enable heme binding activity and oxygen binding activity. Expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F49E2.4a
      F49E2.4b
    Corresponding_transcript: F49E2.4a.1
      F49E2.4a.2
      F49E2.4b.1
      F49E2.4b.2
    Other_sequence: NBC05011_1
      Acan_isotig12975
      Tcir_isotig24085
      Tcir_isotig32162
      NB10020
      Dviv_isotig24816
      Tcir_isotig27030
    Associated_feature: WBsf1006477
      WBsf1023592
      WBsf237778
      WBsf237779
  Experimental_info: RNAi_result: WBRNAi00032546 Inferred_automatically: RNAi_primary
      WBRNAi00047863 Inferred_automatically: RNAi_primary
      WBRNAi00015328 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr8497
      Expr1019823
      Expr1151694
      Expr2012052
      Expr2030288
    Drives_construct: WBCnstr00013326
      WBCnstr00031842
    Construct_product: WBCnstr00031842
    Microarray_results (20)
    Expression_cluster (111)
    Interaction: WBInteraction000032147
      WBInteraction000179968
      WBInteraction000200262
      WBInteraction000245136
      WBInteraction000327744
  Map_info: Map: X Position: 1.42181
    Positive: Positive_clone: F49E2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031066
    WBPaper00032254
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene