Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00009887

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00009887SMapS_parentSequenceF49E2
IdentityVersion2
NameCGC_nameglb-17Paper_evidenceWBPaper00031066
Person_evidenceWBPerson1540
Sequence_nameF49E2.4
Molecular_nameF49E2.4a
F49E2.4a.1
CE01012
F49E2.4b
CE44201
F49E2.4a.2
F49E2.4b.1
F49E2.4b.2
Other_nameCELE_F49E2.4Accession_evidenceNDBBX284606
Public_nameglb-17
DB_infoDatabaseAceViewgeneXK192
WormQTLgeneWBGene00009887
WormFluxgeneWBGene00009887
NDBlocus_tagCELE_F49E2.4
NCBIgene186039
RefSeqproteinNM_001270149.4
NM_001270150.3
TREEFAMTREEFAM_IDTF321698
TrEMBLUniProtAccD0VWM4
Q20623
UniProt_GCRPUniProtAccD0VWM4
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
222 Oct 2007 15:16:42WBPerson2970Name_changeCGC_nameglb-17
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classglb
Allele (57)
RNASeq_FPKM (74)
GO_annotation00117448
00117449
Ortholog (26)
ParalogWBGene00011296Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00007741Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008996Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00077763Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionglb-17 encodes a globin with no obvious function in mass RNAi assays.Paper_evidenceWBPaper00025067
WBPaper00031066
Curator_confirmedWBPerson567
Date_last_updated17 Dec 2007 00:00:00
Automated_descriptionPredicted to enable heme binding activity and oxygen binding activity. Expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF49E2.4a
F49E2.4b
Corresponding_transcriptF49E2.4a.1
F49E2.4a.2
F49E2.4b.1
F49E2.4b.2
Other_sequenceNBC05011_1
Acan_isotig12975
Tcir_isotig24085
Tcir_isotig32162
NB10020
Dviv_isotig24816
Tcir_isotig27030
Associated_featureWBsf1006477
WBsf1023592
WBsf237778
WBsf237779
Experimental_infoRNAi_resultWBRNAi00032546Inferred_automaticallyRNAi_primary
WBRNAi00047863Inferred_automaticallyRNAi_primary
WBRNAi00015328Inferred_automaticallyRNAi_primary
Expr_patternExpr8497
Expr1019823
Expr1151694
Expr2012052
Expr2030288
Drives_constructWBCnstr00013326
WBCnstr00031842
Construct_productWBCnstr00031842
Microarray_results (20)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_larva_enriched
WBPaper00037950:all-neurons_larva_SelectivelyEnriched
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00044736:flat_dev_expression
WBPaper00045316:prg-1_upregulated_L3
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050344:ASER-neuron_enriched
WBPaper00050344:PLM-neuron_enriched
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_upregulated
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061340:AUA
WBPaper00061340:PVP
WBPaper00061340:PVT
WBPaper00061340:URX
WBPaper00061341:28C_24h_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:mtd-1-mec-18
WBPaper00061651:AUA_enriched
WBPaper00061651:AVG_enriched
WBPaper00061651:PVN_enriched
WBPaper00061651:PVP_enriched
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065623:155
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065841:7_1
WBPaper00065841:7_2
WBPaper00065841:39_2
WBPaper00065841:50_0
WBPaper00065841:80_0
WBPaper00065841:90_0
WBPaper00065841:131_0
WBPaper00065841:140_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_21
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00032948:StarveUp2
WBPaper00035227:heat_shock_regulated
WBPaper00035588:alg-1(-)_upregulated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_I
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040876:mir-35_downregulated
WBPaper00047070:N2_starvation_upregulated
InteractionWBInteraction000032147
WBInteraction000179968
WBInteraction000200262
WBInteraction000245136
WBInteraction000327744
Map_infoMapXPosition1.42181
PositivePositive_cloneF49E2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031066
WBPaper00032254
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene