WormBase Tree Display for Gene: WBGene00009886
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WBGene00009886 | SMap | S_parent | Sequence | F49E2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F49E2.2 | |||||||
Molecular_name | F49E2.2a | ||||||||
F49E2.2a.1 | |||||||||
CE31527 | |||||||||
F49E2.2c | |||||||||
CE23752 | |||||||||
F49E2.2a.2 | |||||||||
F49E2.2a.3 | |||||||||
F49E2.2a.4 | |||||||||
F49E2.2c.1 | |||||||||
Other_name | CELE_F49E2.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | F49E2.2 | ||||||||
DB_info | Database (9) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (118) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (23) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including gonad; mechanosensory neurons; rectal epithelial cell; rectum; and somatic gonad precursor based on microarray; tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including skn-1; glp-1; and dpy-10 based on RNA-seq; proteomic; and microarray studies. Is affected by thirteen chemicals including stavudine; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SH3 domain; Phosphorylation site; and SH3-like domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F49E2.2a | |||||||
F49E2.2c | |||||||||
Corresponding_CDS_history | F49E2.2:wp83 | ||||||||
F49E2.2b:wp271 | |||||||||
Corresponding_transcript | F49E2.2a.1 | ||||||||
F49E2.2a.2 | |||||||||
F49E2.2a.3 | |||||||||
F49E2.2a.4 | |||||||||
F49E2.2c.1 | |||||||||
Other_sequence | ES409587.1 | ||||||||
CR03260 | |||||||||
HBC02261_1 | |||||||||
Hbac_isotig04025 | |||||||||
CRC06179_1 | |||||||||
Acan_isotig08913 | |||||||||
Dviv_isotig25164 | |||||||||
Oden_contig24378 | |||||||||
CJC06859_1 | |||||||||
CRC09473_1 | |||||||||
Associated_feature | WBsf663180 | ||||||||
WBsf663181 | |||||||||
WBsf1006475 | |||||||||
WBsf1006476 | |||||||||
WBsf236179 | |||||||||
WBsf236180 | |||||||||
WBsf236181 | |||||||||
WBsf236182 | |||||||||
Experimental_info | RNAi_result | WBRNAi00015326 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047862 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032545 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015327 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011257 | ||||||||
Expr1034311 | |||||||||
Expr1151693 | |||||||||
Expr2003942 | |||||||||
Expr2022164 | |||||||||
Drives_construct | WBCnstr00031843 | ||||||||
Construct_product | WBCnstr00031843 | ||||||||
Microarray_results (29) | |||||||||
Expression_cluster (165) | |||||||||
Interaction (39) | |||||||||
Map_info | Positive | Positive_clone | F49E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | 1.4213 | |||||||
Method | Gene |