WormBase Tree Display for Gene: WBGene00009880
expand all nodes | collapse all nodes | view schema
| WBGene00009880 | SMap | S_parent | Sequence | F49C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F49C12.11 | |||||||
| Molecular_name | F49C12.11 | ||||||||
| F49C12.11.1 | |||||||||
| CE03371 | |||||||||
| Other_name | CELE_F49C12.11 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F49C12.11 | ||||||||
| DB_info | Database | AceView | gene | 4K83 | |||||
| WormQTL | gene | WBGene00009880 | |||||||
| WormFlux | gene | WBGene00009880 | |||||||
| NDB | locus_tag | CELE_F49C12.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009880|UniProtKB=Q20588 | |||||||
| family | PTHR28632 | ||||||||
| NCBI | gene | 177756 | |||||||
| RefSeq | protein | NM_069233.9 | |||||||
| SwissProt | UniProtAcc | Q20588 | |||||||
| TREEFAM | TREEFAM_ID | TF300250 | |||||||
| UniProt_GCRP | UniProtAcc | Q20588 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| Strain | WBStrain00002956 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4680 | ||||||||
| Ortholog (14) | |||||||||
| Structured_description | Automated_description | Expressed in coelomocyte; hypodermis; and neurons. Is predicted to encode a protein with the following domains: Translation machinery associated TMA7 and Phosphorylation site. Is an ortholog of human TMA7 (translation machinery associated 7 homolog). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F49C12.11 | |||||||
| Corresponding_transcript | F49C12.11.1 | ||||||||
| Other_sequence (132) | |||||||||
| Associated_feature | WBsf646224 | ||||||||
| WBsf228810 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047797 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00025554 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064693 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076449 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064671 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032511 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008820 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6120 | ||||||||
| Expr13600 | |||||||||
| Expr1015659 | |||||||||
| Expr1034307 | |||||||||
| Expr1151632 | |||||||||
| Expr2003908 | |||||||||
| Expr2022130 | |||||||||
| Drives_construct | WBCnstr00003462 | ||||||||
| WBCnstr00031849 | |||||||||
| Construct_product | WBCnstr00031849 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Positive | Positive_clone | F49C12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.16478 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
