WormBase Tree Display for Gene: WBGene00009880
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WBGene00009880 | SMap | S_parent | Sequence | F49C12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F49C12.11 | |||||||
Molecular_name | F49C12.11 | ||||||||
F49C12.11.1 | |||||||||
CE03371 | |||||||||
Other_name | CELE_F49C12.11 | Accession_evidence | NDB | BX284604 | |||||
Public_name | F49C12.11 | ||||||||
DB_info | Database | AceView | gene | 4K83 | |||||
WormQTL | gene | WBGene00009880 | |||||||
WormFlux | gene | WBGene00009880 | |||||||
NDB | locus_tag | CELE_F49C12.11 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009880|UniProtKB=Q20588 | |||||||
family | PTHR28632 | ||||||||
NCBI | gene | 177756 | |||||||
RefSeq | protein | NM_069233.9 | |||||||
SwissProt | UniProtAcc | Q20588 | |||||||
TREEFAM | TREEFAM_ID | TF300250 | |||||||
UniProt_GCRP | UniProtAcc | Q20588 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (14) | |||||||||
Strain | WBStrain00002956 | ||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP4680 | ||||||||
Ortholog (14) | |||||||||
Structured_description | Automated_description | Expressed in coelomocyte; hypodermis; and neurons. Is predicted to encode a protein with the following domains: Translation machinery associated TMA7 and Phosphorylation site. Is an ortholog of human TMA7 (translation machinery associated 7 homolog). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F49C12.11 | |||||||
Corresponding_transcript | F49C12.11.1 | ||||||||
Other_sequence (132) | |||||||||
Associated_feature | WBsf646224 | ||||||||
WBsf228810 | |||||||||
Experimental_info | RNAi_result | WBRNAi00047797 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00025554 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00064693 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076449 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00064671 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032511 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00008820 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr6120 | ||||||||
Expr13600 | |||||||||
Expr1015659 | |||||||||
Expr1034307 | |||||||||
Expr1151632 | |||||||||
Expr2003908 | |||||||||
Expr2022130 | |||||||||
Drives_construct | WBCnstr00003462 | ||||||||
WBCnstr00031849 | |||||||||
Construct_product | WBCnstr00031849 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (137) | |||||||||
Interaction | WBInteraction000006198 | ||||||||
WBInteraction000006220 | |||||||||
WBInteraction000191293 | |||||||||
WBInteraction000201761 | |||||||||
WBInteraction000211540 | |||||||||
WBInteraction000231072 | |||||||||
WBInteraction000235855 | |||||||||
WBInteraction000292104 | |||||||||
WBInteraction000299811 | |||||||||
WBInteraction000310331 | |||||||||
WBInteraction000314285 | |||||||||
WBInteraction000327482 | |||||||||
WBInteraction000410151 | |||||||||
WBInteraction000411415 | |||||||||
WBInteraction000418518 | |||||||||
WBInteraction000433711 | |||||||||
WBInteraction000441240 | |||||||||
WBInteraction000443407 | |||||||||
WBInteraction000576508 | |||||||||
WBInteraction000580673 | |||||||||
WBInteraction000583852 | |||||||||
WBInteraction000584292 | |||||||||
Map_info | Positive | Positive_clone | F49C12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 4.16478 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |