WormBase Tree Display for Gene: WBGene00009826
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| WBGene00009826 | SMap | S_parent | Sequence | F47G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F47G4.5 | |||||||
| Molecular_name | F47G4.5 | ||||||||
| F47G4.5.1 | |||||||||
| CE18703 | |||||||||
| Other_name | CELE_F47G4.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | F47G4.5 | ||||||||
| DB_info | Database | AceView | gene | 1O654 | |||||
| WormQTL | gene | WBGene00009826 | |||||||
| WormFlux | gene | WBGene00009826 | |||||||
| NDB | locus_tag | CELE_F47G4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009826|UniProtKB=Q9XTS3 | |||||||
| family | PTHR19845 | ||||||||
| NCBI | gene | 173270 | |||||||
| RefSeq | protein | NM_061051.5 | |||||||
| TREEFAM | TREEFAM_ID | TF343524 | |||||||
| TrEMBL | UniProtAcc | Q9XTS3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XTS3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| Strain | WBStrain00032698 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00101084 | ||||||||
| 00101085 | |||||||||
| 00101086 | |||||||||
| 00101087 | |||||||||
| 00101088 | |||||||||
| 00101089 | |||||||||
| 00101090 | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00003184 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00009825 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | F47G4.5 encodes a paralog of MEI-2 that, like MEI-2, binds MEI-1 in vitro; F47G4.5 might thus be an alternative ligand of MEI-1 in vivo. | Paper_evidence | WBPaper00004129 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Contributes to microtubule severing ATPase activity. Involved in microtubule depolymerization. Part of katanin complex. Expressed in amphid neurons; inner labial neurons; outer labial neurons; and phasmid neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F47G4.5 | |||||||
| Corresponding_transcript | F47G4.5.1 | ||||||||
| Associated_feature | WBsf649733 | ||||||||
| WBsf986022 | |||||||||
| WBsf220567 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003700 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032452 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115723 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098000 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047683 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12682 | ||||||||
| Expr12683 | |||||||||
| Expr1019835 | |||||||||
| Expr1151524 | |||||||||
| Expr2003865 | |||||||||
| Expr2022088 | |||||||||
| Drives_construct | WBCnstr00022602 | ||||||||
| WBCnstr00022603 | |||||||||
| WBCnstr00031889 | |||||||||
| Construct_product | WBCnstr00022603 | ||||||||
| WBCnstr00031889 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Positive | Positive_clone | F47G4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 22.9922 | |||||||
| Reference | WBPaper00004129 | ||||||||
| Method | Gene |
