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WormBase Tree Display for Gene: WBGene00009806

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Name Class

WBGene00009806SMapS_parentSequenceF47B8
IdentityVersion2
NameSequence_nameF47B8.5
Molecular_nameF47B8.5a
F47B8.5a.1
CE46890
F47B8.5b
CE46961
F47B8.5b.1
Other_nameCELE_F47B8.5Accession_evidenceNDBBX284605
Public_nameF47B8.5
DB_infoDatabaseAceViewgene5O806
WormQTLgeneWBGene00009806
WormFluxgeneWBGene00009806
NDBlocus_tagCELE_F47B8.5
PanthergeneCAEEL|WormBase=WBGene00009806|UniProtKB=H2FLH8
familyPTHR22989
NCBIgene185897
RefSeqproteinNM_001269653.3
NM_001269652.3
TREEFAMTREEFAM_IDTF316021
TrEMBLUniProtAccH2FLH9
H2FLH8
UniProt_GCRPUniProtAccH2FLH8
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
219 Dec 2011 15:40:19WBPerson4025EventSplit_intoWBGene00219324
Split_intoWBGene00219324
StatusLive
Gene_infoBiotypeSO:0001217
Allele (45)
RNASeq_FPKM (74)
GO_annotation00021326
00021327
Ortholog (38)
Paralog (35)
Structured_descriptionAutomated_descriptionPredicted to enable methyltransferase activity. Predicted to be involved in methylation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF47B8.5a
F47B8.5b
Corresponding_CDS_historyF47B8.5:wp156
F47B8.5:wp229
Corresponding_transcriptF47B8.5a.1
F47B8.5b.1
Other_sequenceFD514413.1
BM01000
CSC01451_1
FD514469.1
CRC09073_1
Associated_featureWBsf653376
WBsf669647
WBsf234937
Experimental_infoRNAi_resultWBRNAi00047622Inferred_automaticallyRNAi_primary
WBRNAi00015163Inferred_automaticallyRNAi_primary
WBRNAi00032422Inferred_automaticallyRNAi_primary
Expr_patternExpr1013121
Expr1151463
Expr2003846
Expr2022067
Drives_constructWBCnstr00031905
Construct_productWBCnstr00031905
Microarray_results (11)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038168:lin-15B(n744)_downregulated
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00043945:MeHg_upregulated
WBPaper00044260:1-methylnicotinamide_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:oscillating_dev_expression
WBPaper00045017:blmp-1(tm548)_downregulated
WBPaper00045316:prg-1_upregulated_L4
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00049018:ham-3(RNAi)_downregulated
WBPaper00049018:swsn-2.2(RNAi)_downregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050990:hypodermis_enriched
WBPaper00050990:hypodermis_expressed
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:stavudine_72h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053402:cco-1(RNAi)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055013:hmg-4(RNAi)_downregulated
WBPaper00055013:spt-16(RNAi)_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:nuo-6(qm200)_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056169:rrf-3(pk1426)_downregulated_L3
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056290:mdt-15(mg584)_upregulated
WBPaper00056330:glycine_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058927:high-redox-state_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059117:B.subtilis_upregulated
WBPaper00059231:alh-6(lax105)_L4_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059987:Wounding_downregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060764:swsn-1(os22ts)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:Seam_cell
WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062534:fat-P-80_downregulated
WBPaper00062534:fat-P-80_downregulated_ech-6(RNAi)
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065841:117_0
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_5
WBPaper00040998:nhr-66_regulated
WBPaper00056330:mrps-5(RNAi)_upregulated
[cgc6390]:Cluster_B
InteractionWBInteraction000452151
Map_infoPositivePositive_cloneF47B8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV6.22909
MethodGene