WormBase Tree Display for Gene: WBGene00009732

WBGene00009732 SMap: S_parent: Sequence: F45G2
  Identity: Version: 2
    Name: CGC_name: cope-1 Person_evidence: WBPerson3188
      Sequence_name: F45G2.4
      Molecular_name: F45G2.4
        F45G2.4.1
        CE16047
      Other_name: CELE_F45G2.4 Accession_evidence: NDB BX284603
      Public_name: cope-1
    DB_info: Database: AceView gene 3O517
        WormQTL gene WBGene00009732
        WormFlux gene WBGene00009732
        NDB locus_tag CELE_F45G2.4
        Panther gene CAEEL|WormBase=WBGene00009732|UniProtKB=O62246
          family PTHR10805
        NCBI gene 176766
        RefSeq protein NM_067370.7
        SwissProt UniProtAcc O62246
        TREEFAM TREEFAM_ID TF313390
        UniProt_GCRP UniProtAcc O62246
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Aug 2013 16:41:57 WBPerson2970 Name_change: CGC_name: cope-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cope
    Allele (23)
    Strain: WBStrain00049328
    RNASeq_FPKM (74)
    GO_annotation (15)
    Contained_in_operon: CEOP3788
    Ortholog (38)
    Structured_description: Concise_description: F45G2.4 encodes an epsilon subunit of the coatomer (COPI) complex; in mass RNAi assays, F45G2.4 is required for larval viability, proper locomotion, and properly rapid growth. Paper_evidence: WBPaper00006395
            WBPaper00012764
            WBPaper00012858
            WBPaper00012863
            WBPaper00012889
            WBPaper00013106
            WBPaper00013627
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable structural molecule activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and intra-Golgi vesicle-mediated transport. Located in mitochondrion. Is an ortholog of human COPE (COPI coat complex subunit epsilon). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F45G2.4
    Corresponding_transcript: F45G2.4.1
    Other_sequence: CJC04570_1
      CJC01076_1
      CBC04683_1
    Associated_feature: WBsf645715
      WBsf226008
  Experimental_info: RNAi_result: WBRNAi00047437 Inferred_automatically: RNAi_primary
      WBRNAi00025518 Inferred_automatically: RNAi_primary
      WBRNAi00006013 Inferred_automatically: RNAi_primary
      WBRNAi00032323 Inferred_automatically: RNAi_primary
      WBRNAi00027344 Inferred_automatically: RNAi_primary
      WBRNAi00025517 Inferred_automatically: RNAi_primary
      WBRNAi00015042 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9522
      Expr1019686
      Expr1034258
      Expr1151278
      Expr2010459
      Expr2028699
    Drives_construct: WBCnstr00031958
    Construct_product: WBCnstr00014087
      WBCnstr00031958
    Microarray_results (21)
    Expression_cluster (91)
    Interaction (30)
  Map_info: Map: III Position: 21.2136
    Positive: Positive_clone: F45G2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038444
    WBPaper00038491
    WBPaper00041771
    WBPaper00049828
    WBPaper00055090
    WBPaper00065275
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene