WormBase Tree Display for Gene: WBGene00009681
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WBGene00009681 | SMap | S_parent | Sequence | F44D12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | gipc-2 | Person_evidence | WBPerson260 | |||
Sequence_name | F44D12.4 | ||||||
Molecular_name | F44D12.4 | ||||||
F44D12.4.1 | |||||||
CE32187 | |||||||
Other_name | CELE_F44D12.4 | Accession_evidence | NDB | BX284604 | |||
Public_name | gipc-2 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gipc | ||||||
Allele (20) | |||||||
Strain | WBStrain00031849 | ||||||
RNASeq_FPKM (74) | |||||||
Ortholog (49) | |||||||
Paralog | WBGene00016440 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Expressed in spermatid. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 15 and oculopharyngodistal myopathy 2. Human GIPC1 enables signaling receptor binding activity. Is predicted to encode a protein with the following domains: PDZ domain-containing protein GIPC1/2/3; PDZ superfamily; and PDZ domain. Is an ortholog of human GIPC1 (GIPC PDZ domain containing family member 1) and GIPC3 (GIPC PDZ domain containing family member 3). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0110470 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18183) | ||
DOID:0081298 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1226) | ||||
Molecular_info | Corresponding_CDS | F44D12.4 | |||||
Corresponding_CDS_history | F44D12.4:wp88 | ||||||
Corresponding_transcript | F44D12.4.1 | ||||||
Other_sequence (19) | |||||||
Associated_feature | WBsf230653 | ||||||
Experimental_info | RNAi_result | WBRNAi00022537 | Inferred_automatically | RNAi_primary | |||
WBRNAi00000250 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032237 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014927 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047277 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram206 | ||||||
Expr6070 | |||||||
Expr15152 | |||||||
Expr1151133 | |||||||
Expr2012041 | |||||||
Expr2030277 | |||||||
Drives_construct | WBCnstr00002725 | ||||||
WBCnstr00031997 | |||||||
Construct_product | WBCnstr00031997 | ||||||
Antibody | WBAntibody00002867 | ||||||
Microarray_results (16) | |||||||
Expression_cluster (278) | |||||||
Interaction (229) | |||||||
Map_info | Map | IV | Position | 4.46701 | |||
Positive | Positive_clone | F44D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00056589 | |||||||
WBPaper00060732 | |||||||
WBPaper00062388 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |