WormBase Tree Display for Gene: WBGene00009663

WBGene00009663 SMap: S_parent: Sequence: F43G6
  Identity: Version: 3
    Name: CGC_name: hda-5 Person_evidence: WBPerson260
            WBPerson2136
      Sequence_name: F43G6.11
      Molecular_name: F43G6.11
        F43G6.11.1
        CE31698
      Other_name: CELE_F43G6.11 Accession_evidence: NDB BX284602
      Public_name: hda-5
    DB_info: Database: AceView gene 2M91
        WormQTL gene WBGene00009663
        WormFlux gene WBGene00009663
        NDB locus_tag CELE_F43G6.11
        Panther gene CAEEL|WormBase=WBGene00009663|UniProtKB=Q8I4I9
          family PTHR45634
        NCBI gene 174811
        RefSeq protein NM_171045.7
        TrEMBL UniProtAcc Q8I4I9
        UniProt_GCRP UniProtAcc Q8I4I9
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 19 Mar 2012 12:16:35 WBPerson1983 Event: Split_into: WBGene00219378
        3 12 Apr 2012 16:15:43 WBPerson2970 Name_change: CGC_name: hda-5
      Split_into: WBGene00219378
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hda
    Allele (75)
    Strain: WBStrain00055649
      WBStrain00055648
    RNASeq_FPKM (74)
    GO_annotation: 00079563
      00079564
      00079565
    Ortholog (42)
    Paralog: WBGene00001837 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00001838 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00219378 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018319 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00001834 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001835 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001836 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007953 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00009657 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable histone deacetylase activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be part of histone deacetylase complex. Is an ortholog of human HDAC10 (histone deacetylase 10). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: F43G6.11
    Corresponding_CDS_history: F43G6.11b:wp231
    Corresponding_transcript: F43G6.11.1
    Other_sequence: AM743592.1
      JI172800.1
      Hbac_isotig01688
      FK806295.1
      TDC02717_1
      OOC01981_1
      AM743424.1
      CBC08490_1
    Associated_feature: WBsf989908
      WBsf989909
      WBsf222199
      WBsf222200
  Experimental_info: RNAi_result: WBRNAi00091921 Inferred_automatically: RNAi_primary
      WBRNAi00014889 Inferred_automatically: RNAi_primary
      WBRNAi00047207 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025523
      Expr1151067
      Expr2012388
      Expr2030624
    Drives_construct: WBCnstr00032014
    Construct_product: WBCnstr00032014
    Microarray_results (20)
    Expression_cluster (179)
    Interaction: WBInteraction000143731
      WBInteraction000466595
  Map_info: Map: II Position: 4.04942
    Positive: Positive_clone: F43G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027148
    WBPaper00038491
    WBPaper00055090
    WBPaper00065308
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene