WormBase Tree Display for Gene: WBGene00009620
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| WBGene00009620 | SMap | S_parent | Sequence | F41E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fip-5 | Person_evidence | WBPerson168 | |||||
| Sequence_name | F41E7.4 | ||||||||
| Molecular_name | F41E7.4 | ||||||||
| F41E7.4.1 | |||||||||
| CE03304 | |||||||||
| Other_name | CELE_F41E7.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | fip-5 | ||||||||
| DB_info | Database | AceView | gene | XK921 | |||||
| WormQTL | gene | WBGene00009620 | |||||||
| WormFlux | gene | WBGene00009620 | |||||||
| NDB | locus_tag | CELE_F41E7.4 | |||||||
| NCBI | gene | 181237 | |||||||
| RefSeq | protein | NM_077325.6 | |||||||
| TrEMBL | UniProtAcc | Q20276 | |||||||
| UniProt_GCRP | UniProtAcc | Q20276 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Apr 2007 10:48:52 | WBPerson2970 | Name_change | CGC_name | fip-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fip | ||||||||
| Allele (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00143732 | Caenorhabditis brenneri | From_analysis | OMA | |||||
| WBGene00058492 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| chrX_pilon.g19880 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in PLM; PVW; germline precursor cell; seam cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty chemicals including rotenone; bisphenol A; and juglone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F41E7.4 | |||||||
| Corresponding_transcript | F41E7.4.1 | ||||||||
| Associated_feature | WBsf648459 | ||||||||
| WBsf648460 | |||||||||
| WBsf663229 | |||||||||
| WBsf1006669 | |||||||||
| WBsf1006670 | |||||||||
| WBsf236266 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047003 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002225 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032099 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014755 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019803 | ||||||||
| Expr1150867 | |||||||||
| Expr2011767 | |||||||||
| Expr2030004 | |||||||||
| Drives_construct | WBCnstr00032049 | ||||||||
| Construct_product | WBCnstr00032049 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (230) | |||||||||
| Interaction | WBInteraction000293896 | ||||||||
| WBInteraction000320166 | |||||||||
| WBInteraction000392555 | |||||||||
| Map_info | Map | X | Position | 1.94777 | |||||
| Positive | Positive_clone | F41E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
