WormBase Tree Display for Gene: WBGene00009620
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WBGene00009620 | SMap | S_parent | Sequence | F41E7 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | fip-5 | Person_evidence | WBPerson168 | |||
Sequence_name | F41E7.4 | ||||||
Molecular_name | F41E7.4 | ||||||
F41E7.4.1 | |||||||
CE03304 | |||||||
Other_name | CELE_F41E7.4 | Accession_evidence | NDB | BX284606 | |||
Public_name | fip-5 | ||||||
DB_info | Database | AceView | gene | XK921 | |||
WormQTL | gene | WBGene00009620 | |||||
WormFlux | gene | WBGene00009620 | |||||
NDB | locus_tag | CELE_F41E7.4 | |||||
NCBI | gene | 181237 | |||||
RefSeq | protein | NM_077325.6 | |||||
TrEMBL | UniProtAcc | Q20276 | |||||
UniProt_GCRP | UniProtAcc | Q20276 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fip | ||||||
Allele (13) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00143732 | Caenorhabditis brenneri | From_analysis | OMA | |||
WBGene00058492 | Caenorhabditis remanei | From_analysis | OMA | ||||
chrX_pilon.g19880 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Enriched in PLM; PVW; germline precursor cell; seam cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty chemicals including rotenone; bisphenol A; and juglone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F41E7.4 | |||||
Corresponding_transcript | F41E7.4.1 | ||||||
Associated_feature | WBsf648459 | ||||||
WBsf648460 | |||||||
WBsf663229 | |||||||
WBsf1006669 | |||||||
WBsf1006670 | |||||||
WBsf236266 | |||||||
Experimental_info | RNAi_result | WBRNAi00047003 | Inferred_automatically | RNAi_primary | |||
WBRNAi00002225 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032099 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014755 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1019803 | ||||||
Expr1150867 | |||||||
Expr2011767 | |||||||
Expr2030004 | |||||||
Drives_construct | WBCnstr00032049 | ||||||
Construct_product | WBCnstr00032049 | ||||||
Microarray_results (15) | |||||||
Expression_cluster (230) | |||||||
Interaction | WBInteraction000293896 | ||||||
WBInteraction000320166 | |||||||
WBInteraction000392555 | |||||||
Map_info | Map | X | Position | 1.94777 | |||
Positive | Positive_clone | F41E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |