WormBase Tree Display for Gene: WBGene00009580
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WBGene00009580 | SMap | S_parent | Sequence | F40F9 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | xbx | ||||||
Allele (75) | |||||||
Strain | WBStrain00001364 | ||||||
WBStrain00029250 | |||||||
WBStrain00031668 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00084480 | ||||||
00084481 | |||||||
00084482 | |||||||
00084483 | |||||||
00084484 | |||||||
00084485 | |||||||
Ortholog (48) | |||||||
Paralog | WBGene00006470 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00006479 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00019664 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00021537 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to be involved in negative regulation of apoptotic signaling pathway. Predicted to be located in Golgi apparatus; endoplasmic reticulum; and membrane. Expressed in neurons; pharyngeal muscle cell; tail; and ventral nerve cord. Is an ortholog of human GRINA (glutamate ionotropic receptor NMDA type subunit associated protein 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS (2) | ||||||
Corresponding_CDS_history | F40F9.1:wp82 | ||||||
Corresponding_transcript | F40F9.1c | ||||||
F40F9.1a.1 | |||||||
F40F9.1a.2 | |||||||
F40F9.1b.1 | |||||||
F40F9.1b.2 | |||||||
F40F9.1b.3 | |||||||
Other_sequence (53) | |||||||
Associated_feature | WBsf232286 | ||||||
WBsf232287 | |||||||
WBsf232288 | |||||||
Experimental_info | RNAi_result (11) | ||||||
Expr_pattern | Expr3290 | ||||||
Expr3484 | |||||||
Expr6014 | |||||||
Expr10142 | |||||||
Expr1023948 | |||||||
Expr1034192 | |||||||
Expr1150748 | |||||||
Expr2018094 | |||||||
Expr2036232 | |||||||
Drives_construct | WBCnstr00002254 | ||||||
WBCnstr00011287 | |||||||
WBCnstr00011417 | |||||||
Microarray_results (35) | |||||||
Expression_cluster (113) | |||||||
Interaction (27) | |||||||
Map_info | Map | V | Position | 2.08834 | Error | 0.005872 | |
Positive | Positive_clone | F40F9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5142 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00025051 | ||||||
WBPaper00032078 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00059097 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |