WormBase Tree Display for Gene: WBGene00009578
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| WBGene00009578 | SMap | S_parent | Sequence | F40F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F40F8.5 | |||||||
| Molecular_name (30) | |||||||||
| Other_name | CELE_F40F8.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F40F8.5 | ||||||||
| DB_info | Database | AceView | gene | 2L424 | |||||
| WormQTL | gene | WBGene00009578 | |||||||
| WormFlux | gene | WBGene00009578 | |||||||
| NDB | locus_tag | CELE_F40F8.5 | |||||||
| NCBI | gene | 174702 | |||||||
| RefSeq | protein | NM_001267353.5 | |||||||
| NM_001267356.5 | |||||||||
| NM_001267358.5 | |||||||||
| NM_001267355.3 | |||||||||
| NM_001267354.5 | |||||||||
| NM_001267360.3 | |||||||||
| NM_001267357.3 | |||||||||
| NM_001267351.5 | |||||||||
| NM_001267359.3 | |||||||||
| NM_001267352.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF316606 | |||||||
| TrEMBL | UniProtAcc | H2L299 | |||||||
| H2L2A3 | |||||||||
| H2L2A1 | |||||||||
| H2L296 | |||||||||
| H2L2A4 | |||||||||
| H2L2A2 | |||||||||
| H2L2A5 | |||||||||
| H2L2A6 | |||||||||
| H2L298 | |||||||||
| H2L2A0 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L2A2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Jul 2006 09:56:25 | WBPerson1983 | Event | Split_into | WBGene00044916 | ||||
| Split_into | WBGene00044916 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Enriched in distal tip cell; head mesodermal cell; intestine; muscle cell; and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by thirteen chemicals including methylmercury hydroxide; rotenone; and D-glucopyranose based on RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40F8.5a | |||||||
| F40F8.5b | |||||||||
| F40F8.5c | |||||||||
| F40F8.5d | |||||||||
| F40F8.5e | |||||||||
| F40F8.5f | |||||||||
| F40F8.5g | |||||||||
| F40F8.5h | |||||||||
| F40F8.5i | |||||||||
| F40F8.5j | |||||||||
| Corresponding_CDS_history | F40F8.5:wp92 | ||||||||
| F40F8.5:wp162 | |||||||||
| F40F8.5:wp228 | |||||||||
| Corresponding_transcript | F40F8.5a.1 | ||||||||
| F40F8.5b.1 | |||||||||
| F40F8.5c.1 | |||||||||
| F40F8.5d.1 | |||||||||
| F40F8.5e.1 | |||||||||
| F40F8.5f.1 | |||||||||
| F40F8.5g.1 | |||||||||
| F40F8.5h.1 | |||||||||
| F40F8.5i.1 | |||||||||
| F40F8.5j.1 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf716711 | ||||||||
| WBsf223898 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00083275 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1022901 | ||||||||
| Expr1034190 | |||||||||
| Expr1150744 | |||||||||
| Expr2003540 | |||||||||
| Expr2021757 | |||||||||
| Drives_construct | WBCnstr00032088 | ||||||||
| Construct_product | WBCnstr00032088 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (182) | |||||||||
| Interaction (110) | |||||||||
| Map_info | Positive | Positive_clone | F40F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 3.32328 | |||||||
| Reference | WBPaper00033162 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00064934 | |||||||||
| Method | Gene |
