WormBase Tree Display for Gene: WBGene00009542
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| WBGene00009542 | SMap | S_parent | Sequence | F38E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | copb-2 | Person_evidence | WBPerson3188 | |||||
| Sequence_name | F38E11.5 | ||||||||
| Molecular_name | F38E11.5 | ||||||||
| F38E11.5.1 | |||||||||
| CE18673 | |||||||||
| Other_name | CELE_F38E11.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | copb-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Aug 2013 16:41:57 | WBPerson2970 | Name_change | CGC_name | copb-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | copb | ||||||||
| Allele (60) | |||||||||
| Strain | WBStrain00051353 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00008476 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00022119 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00270321 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:0070281 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2232) | ||||
| Molecular_info | Corresponding_CDS | F38E11.5 | |||||||
| Corresponding_transcript | F38E11.5.1 | ||||||||
| Other_sequence (42) | |||||||||
| Associated_feature | WBsf646235 | ||||||||
| WBsf660509 | |||||||||
| WBsf997425 | |||||||||
| WBsf1017967 | |||||||||
| WBsf228831 | |||||||||
| WBsf228832 | |||||||||
| WBsf228833 | |||||||||
| WBsf228834 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr1024749 | ||||||||
| Expr1034170 | |||||||||
| Expr1150600 | |||||||||
| Expr2010457 | |||||||||
| Expr2028697 | |||||||||
| Drives_construct | WBCnstr00032114 | ||||||||
| Construct_product | WBCnstr00032114 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction (107) | |||||||||
| Map_info | Map | IV | Position | 4.27042 | |||||
| Positive | Positive_clone | F38E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003831 | ||||||||
| WBPaper00018551 | |||||||||
| WBPaper00027057 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
