WormBase Tree Display for Gene: WBGene00009475
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| WBGene00009475 | SMap | S_parent | Sequence | F36F2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F36F2.1 | |||||||
| Molecular_name | F36F2.1a | ||||||||
| F36F2.1a.1 | |||||||||
| CE15975 | |||||||||
| F36F2.1b | |||||||||
| CE42715 | |||||||||
| F36F2.1b.1 | |||||||||
| Other_name | CELE_F36F2.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | F36F2.1 | ||||||||
| DB_info | Database | AceView | gene | 1J595 | |||||
| WormQTL | gene | WBGene00009475 | |||||||
| WormFlux | gene | WBGene00009475 | |||||||
| NDB | locus_tag | CELE_F36F2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009475|UniProtKB=O62234 | |||||||
| family | PTHR22739 | ||||||||
| NCBI | gene | 172722 | |||||||
| RefSeq | protein | NM_060025.6 | |||||||
| NM_001136300.4 | |||||||||
| TrEMBL | UniProtAcc | B3WFX8 | |||||||
| O62234 | |||||||||
| UniProt_GCRP | UniProtAcc | O62234 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| Strain | WBStrain00032291 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00006080 | ||||||||
| 00006081 | |||||||||
| 00006082 | |||||||||
| 00006083 | |||||||||
| 00117130 | |||||||||
| 00117131 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00044078 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007897 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008659 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008660 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015193 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018548 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018575 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019950 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021288 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021579 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable actin binding activity. Predicted to be involved in positive regulation of Rho protein signal transduction and positive regulation of transcription by RNA polymerase II. Located in endoplasmic reticulum. Is an ortholog of human ABRA (actin binding Rho activating protein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F36F2.1a | |||||||
| F36F2.1b | |||||||||
| Corresponding_transcript | F36F2.1a.1 | ||||||||
| F36F2.1b.1 | |||||||||
| Other_sequence | NB07350 | ||||||||
| Dviv_isotig12715 | |||||||||
| MA00516 | |||||||||
| FG353453.1 | |||||||||
| MAC02738_1 | |||||||||
| CRC02536_1 | |||||||||
| CR03676 | |||||||||
| NBC02657_1 | |||||||||
| Associated_feature | WBsf643568 | ||||||||
| WBsf643569 | |||||||||
| WBsf218239 | |||||||||
| WBsf218240 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031861 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003616 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046493 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1200 | ||||||||
| Expr5970 | |||||||||
| Expr9548 | |||||||||
| Expr1021258 | |||||||||
| Expr1034147 | |||||||||
| Expr1150371 | |||||||||
| Expr2003393 | |||||||||
| Expr2021606 | |||||||||
| Drives_construct | WBCnstr00002263 | ||||||||
| Construct_product | WBCnstr00014113 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction | WBInteraction000174248 | ||||||||
| WBInteraction000174249 | |||||||||
| WBInteraction000174250 | |||||||||
| WBInteraction000174251 | |||||||||
| WBInteraction000354420 | |||||||||
| WBInteraction000581846 | |||||||||
| Map_info | Positive | Positive_clone | F36F2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 3.39437 | |||||||
| Reference | WBPaper00038444 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
