WormBase Tree Display for Gene: WBGene00009451
expand all nodes | collapse all nodes | view schema
| WBGene00009451 | SMap | S_parent | Sequence | F36A2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cids-2 | Person_evidence | WBPerson71 | |||||
| Sequence_name | F36A2.1 | ||||||||
| Molecular_name (13) | |||||||||
| Other_name | CELE_F36A2.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | cids-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Jan 2008 15:11:50 | WBPerson2970 | Name_change | CGC_name | cids-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cids | ||||||||
| Allele (44) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004984 | ||||||||
| 00004985 | |||||||||
| 00004986 | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00017004 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00015347 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | cids-2 encodes a protein that contains a CTD (C-terminal domain of RNA Pol II)-interacting domain and that is paralogous to CIDS-1; cids-2 was identified genetically as a suppressor of the SynMuv phenotype produced by lin-15AB(n765), a mutation that results in transposition of the 3'-end cleavage and polyadenylation signal of another gene into the third exon of lin-15B; qRT-PCR assays suggest that CIDS-2 plays a role in 3'-end cleavage. | Paper_evidence | WBPaper00032289 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 30 Sep 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA polymerase II complex binding activity. Involved in mRNA 3'-end processing. Is an ortholog of human RPRD2 (regulation of nuclear pre-mRNA domain containing 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F36A2.1a | |||||||
| F36A2.1b | |||||||||
| F36A2.1c | |||||||||
| F36A2.1d | |||||||||
| Corresponding_CDS_history | F36A2.1:wp90 | ||||||||
| F36A2.1a:wp151 | |||||||||
| F36A2.1b:wp151 | |||||||||
| Corresponding_transcript | F36A2.1e | ||||||||
| F36A2.1a.1 | |||||||||
| F36A2.1b.1 | |||||||||
| F36A2.1c.1 | |||||||||
| F36A2.1d.1 | |||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf649420 | ||||||||
| WBsf981065 | |||||||||
| WBsf984512 | |||||||||
| WBsf984513 | |||||||||
| WBsf1010278 | |||||||||
| WBsf219985 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr1018602 | ||||||||
| Expr1034136 | |||||||||
| Expr1150306 | |||||||||
| Expr2010012 | |||||||||
| Expr2028253 | |||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | I | Position | 3.14648 | Error | 0.006318 | |||
| Positive | Positive_clone | F36A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032289 | ||||||||
| WBPaper00036363 | |||||||||
| WBPaper00041428 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
