WormBase Tree Display for Gene: WBGene00009448
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| WBGene00009448 | SMap | S_parent | Sequence | F35H8 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | zfp | ||||||
| Allele (34) | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation | 00067085 | ||||||
| 00067086 | |||||||
| 00067087 | |||||||
| 00067088 | |||||||
| 00067089 | |||||||
| 00067090 | |||||||
| 00067091 | |||||||
| 00067092 | |||||||
| 00067093 | |||||||
| Ortholog (32) | |||||||
| Paralog (16) | |||||||
| Structured_description | Concise_description | zfp-2 encodes a zinc-finger transcription factor; loss of zfp-2 and lin-35/Rb results in almost complete sterility accompanied by defects in somatic gonad development and vulval morphology, as well as polyploidization of somatic cell nuclei; loss of zfp-2 activity by itself reveals that zfp-2 is also required for cosuppression, inhibition of RNAi of some genes, and wild-type levels of expression of a rol-6 extrachromosomal array; a zfp-2::GFP promoter fusion construct is expressed in vulval cells and all somatic gonad structures, such as the spermatheca, sheath cells, uterine cells and distal tip cells (DTCs). | Paper_evidence | WBPaper00025139 | |||
| WBPaper00029258 | |||||||
| Curator_confirmed | WBPerson1843 | ||||||
| Date_last_updated | 14 Jan 2008 00:00:00 | ||||||
| Automated_description | Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in body wall musculature; hermaphrodite gonad; pharynx; seam cell; and vulva. Is an ortholog of human ZBTB32 (zinc finger and BTB domain containing 32). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | F35H8.3 | |||||
| Corresponding_transcript | F35H8.3.1 | ||||||
| Other_sequence (23) | |||||||
| Associated_feature | WBsf644574 | ||||||
| WBsf978441 | |||||||
| WBsf989074 | |||||||
| WBsf221897 | |||||||
| WBsf221898 | |||||||
| WBsf221899 | |||||||
| Transcription_factor | WBTranscriptionFactor000230 | ||||||
| Experimental_info | RNAi_result (13) | ||||||
| Expr_pattern | Expr4593 | ||||||
| Expr7541 | |||||||
| Expr1016356 | |||||||
| Expr1034134 | |||||||
| Expr1150301 | |||||||
| Expr2018129 | |||||||
| Expr2036266 | |||||||
| Drives_construct | WBCnstr00012102 | ||||||
| WBCnstr00012686 | |||||||
| WBCnstr00032175 | |||||||
| Construct_product | WBCnstr00017962 | ||||||
| WBCnstr00021768 | |||||||
| WBCnstr00032175 | |||||||
| Microarray_results (19) | |||||||
| Expression_cluster (134) | |||||||
| Interaction (104) | |||||||
| Map_info | Map | II | Position | 1.58987 | Error | 0.007886 | |
| Positive | Positive_clone | F35H8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference | WBPaper00026592 | ||||||
| WBPaper00029258 | |||||||
| WBPaper00055090 | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
