WormBase Tree Display for Gene: WBGene00009429
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WBGene00009429 | SMap | S_parent | Sequence | F35E12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | irg-5 | Person_evidence | WBPerson9709 | |||||
Sequence_name | F35E12.5 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_F35E12.5 | Accession_evidence | NDB | BX284605 | |||||
Public_name | irg-5 | ||||||||
DB_info | Database | AceView | gene | 5O218 | |||||
WormQTL | gene | WBGene00009429 | |||||||
WormFlux | gene | WBGene00009429 | |||||||
NDB | locus_tag | CELE_F35E12.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009429|UniProtKB=O02357 | |||||||
family | PTHR21447 | ||||||||
NCBI | gene | 185307 | |||||||
RefSeq | protein | NM_001380807.2 | |||||||
TREEFAM | TREEFAM_ID | TF316592 | |||||||
TrEMBL | UniProtAcc | O02357 | |||||||
UniProt_GCRP | UniProtAcc | O02357 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 28 Sep 2016 15:57:39 | WBPerson2970 | Name_change | CGC_name | irg-5 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | irg | ||||||||
Allele (24) | |||||||||
Strain | WBStrain00033153 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00027140 | ||||||||
00027141 | |||||||||
Contained_in_operon | CEOP5575 | ||||||||
Ortholog (48) | |||||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Involved in defense response to Gram-positive bacterium. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F35E12.5 | |||||||
Corresponding_transcript | F35E12.5.1 | ||||||||
Associated_feature | WBsf718448 | ||||||||
WBsf1001883 | |||||||||
WBsf1020761 | |||||||||
WBsf234856 | |||||||||
Experimental_info | RNAi_result | WBRNAi00014332 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082471 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00046337 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00082614 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078256 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr15756 | ||||||||
Expr1012889 | |||||||||
Expr1150225 | |||||||||
Expr2012820 | |||||||||
Drives_construct | WBCnstr00005986 | ||||||||
WBCnstr00017593 | |||||||||
WBCnstr00032194 | |||||||||
Construct_product | WBCnstr00032194 | ||||||||
Microarray_results | SMD_F35E12.5 | ||||||||
179695_at | |||||||||
A_12_P107428 | |||||||||
Aff_F35E12.5 | |||||||||
GPL13394_WBGene00009429 | |||||||||
GPL13914_F35E12.5 | |||||||||
GPL14144_F35E12.5_955-1014_0.953_1_A | |||||||||
GPL19516_CGZ0019733 | |||||||||
GPL21109_F35E12.5 | |||||||||
GPL3518_CE09920 | |||||||||
GPL8304_CE_WBGene00009429_A | |||||||||
GPL8673_F35E12_5P00117 | |||||||||
GPL8673_F35E12_5P00443 | |||||||||
GPL8673_F35E12_5P00570 | |||||||||
GPL9450_F35E12.5 | |||||||||
cea2.i.38279 | |||||||||
Expression_cluster (405) | |||||||||
Interaction (43) | |||||||||
Map_info | Map | V | Position | 5.58641 | |||||
Positive | Positive_clone | F35E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (16) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |