WormBase Tree Display for Gene: WBGene00009112
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| WBGene00009112 | SMap | S_parent | Sequence | F25D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tag-353 | |||||||
| Sequence_name | F25D7.2 | ||||||||
| Molecular_name | F25D7.2 | ||||||||
| F25D7.2.1 | |||||||||
| CE40045 | |||||||||
| Other_name | CELE_F25D7.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | tag-353 | ||||||||
| DB_info | Database | AceView | gene | 1K977 | |||||
| WormQTL | gene | WBGene00009112 | |||||||
| WormFlux | gene | WBGene00009112 | |||||||
| NDB | locus_tag | CELE_F25D7.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009112|UniProtKB=Q93559 | |||||||
| family | PTHR12943 | ||||||||
| NCBI | gene | 172916 | |||||||
| RefSeq | protein | NM_060321.7 | |||||||
| TREEFAM | TREEFAM_ID | TF324319 | |||||||
| TrEMBL | UniProtAcc | Q93559 | |||||||
| UniProt_GCRP | UniProtAcc | Q93559 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Jun 2005 10:02:25 | WBPerson2970 | Name_change | CGC_name | tag-353 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tag | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00036267 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00086113 | ||||||||
| 00086114 | |||||||||
| 00086115 | |||||||||
| 00105797 | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Acts upstream of or within IRE1-mediated unfolded protein response. Predicted to be located in membrane. Is an ortholog of human HERPUD2 (HERPUD family member 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25D7.2 | |||||||
| Corresponding_CDS_history | F25D7.2:wp156 | ||||||||
| Corresponding_transcript | F25D7.2.1 | ||||||||
| Other_sequence (27) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003445 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045491 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075791 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024369 | ||||||||
| Expr1033967 | |||||||||
| Expr1149410 | |||||||||
| Expr2017281 | |||||||||
| Expr2035416 | |||||||||
| Drives_construct | WBCnstr00032455 | ||||||||
| Construct_product | WBCnstr00032455 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (78) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | I | Position | 4.9771 | Error | 0.003298 | |||
| Positive | Positive_clone | F25D7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5301 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026830 | ||||||||
| WBPaper00031865 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
