WormBase Tree Display for Gene: WBGene00008968
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| WBGene00008968 | SMap | S_parent | Sequence | F20C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | elli-1 | Paper_evidence | WBPaper00050743 | |||||
| Person_evidence | WBPerson2113 | ||||||||
| Sequence_name | F20C5.3 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_F20C5.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | elli-1 | ||||||||
| DB_info | Database | AceView | gene | 4J516 | |||||
| WormQTL | gene | WBGene00008968 | |||||||
| WormFlux | gene | WBGene00008968 | |||||||
| NDB | locus_tag | CELE_F20C5.3 | |||||||
| NCBI | gene | 184716 | |||||||
| RefSeq | protein | NM_001268396.2 | |||||||
| NM_001268398.3 | |||||||||
| NM_001268399.3 | |||||||||
| NM_001268397.3 | |||||||||
| SwissProt | UniProtAcc | D3YT16 | |||||||
| UniProt_GCRP | UniProtAcc | D3YT16 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Mar 2017 10:16:47 | WBPerson2970 | Name_change | CGC_name | elli-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | elli | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00006432 | ||||||||
| WBStrain00006415 | |||||||||
| WBStrain00006426 | |||||||||
| WBStrain00006428 | |||||||||
| WBStrain00006430 | |||||||||
| WBStrain00006434 | |||||||||
| WBStrain00006424 | |||||||||
| WBStrain00006423 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007424 | ||||||||
| 00007425 | |||||||||
| 00007426 | |||||||||
| 00007427 | |||||||||
| 00007428 | |||||||||
| 00007429 | |||||||||
| 00007430 | |||||||||
| Contained_in_operon | CEOP4609 | ||||||||
| Ortholog (13) | |||||||||
| Structured_description | Automated_description | Involved in P granule assembly and embryo development. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20C5.3a | |||||||
| F20C5.3b | |||||||||
| F20C5.3c | |||||||||
| F20C5.3d | |||||||||
| Corresponding_CDS_history | F20C5.3:wp109 | ||||||||
| F20C5.3b:wp220 | |||||||||
| F20C5.3c:wp220 | |||||||||
| Corresponding_transcript | F20C5.3a.1 | ||||||||
| F20C5.3b.1 | |||||||||
| F20C5.3c.1 | |||||||||
| F20C5.3d.1 | |||||||||
| Associated_feature | WBsf652012 | ||||||||
| WBsf668123 | |||||||||
| WBsf230464 | |||||||||
| WBsf230465 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013606 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045088 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110548 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031161 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110547 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061538 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13273 | ||||||||
| Expr13274 | |||||||||
| Expr1028932 | |||||||||
| Expr1033902 | |||||||||
| Expr1149037 | |||||||||
| Expr2011277 | |||||||||
| Expr2029513 | |||||||||
| Drives_construct | WBCnstr00032560 | ||||||||
| Construct_product | WBCnstr00032560 | ||||||||
| Regulate_expr_cluster | WBPaper00050743:elli-1(sam-3)_downregulated | ||||||||
| WBPaper00050743:elli-1(sam-3)_upregulated | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | IV | Position | 3.96004 | |||||
| Positive | Positive_clone | F20C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00050743 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
