WormBase Tree Display for Gene: WBGene00008968
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WBGene00008968 | SMap | S_parent | Sequence | F20C5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | elli-1 | Paper_evidence | WBPaper00050743 | |||
Person_evidence | WBPerson2113 | ||||||
Sequence_name | F20C5.3 | ||||||
Molecular_name (12) | |||||||
Other_name | CELE_F20C5.3 | Accession_evidence | NDB | BX284604 | |||
Public_name | elli-1 | ||||||
DB_info | Database | AceView | gene | 4J516 | |||
WormQTL | gene | WBGene00008968 | |||||
WormFlux | gene | WBGene00008968 | |||||
NDB | locus_tag | CELE_F20C5.3 | |||||
NCBI | gene | 184716 | |||||
RefSeq | protein | NM_001268396.2 | |||||
NM_001268398.3 | |||||||
NM_001268399.3 | |||||||
NM_001268397.3 | |||||||
SwissProt | UniProtAcc | D3YT16 | |||||
UniProt_GCRP | UniProtAcc | D3YT16 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | elli | ||||||
Allele (34) | |||||||
Strain | WBStrain00006432 | ||||||
WBStrain00006415 | |||||||
WBStrain00006426 | |||||||
WBStrain00006428 | |||||||
WBStrain00006430 | |||||||
WBStrain00006434 | |||||||
WBStrain00006424 | |||||||
WBStrain00006423 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00007424 | ||||||
00007425 | |||||||
00007426 | |||||||
00007427 | |||||||
00007428 | |||||||
00007429 | |||||||
00007430 | |||||||
Contained_in_operon | CEOP4609 | ||||||
Ortholog (13) | |||||||
Structured_description | Automated_description | Involved in P granule assembly and embryo development. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F20C5.3a | |||||
F20C5.3b | |||||||
F20C5.3c | |||||||
F20C5.3d | |||||||
Corresponding_CDS_history | F20C5.3:wp109 | ||||||
F20C5.3b:wp220 | |||||||
F20C5.3c:wp220 | |||||||
Corresponding_transcript | F20C5.3a.1 | ||||||
F20C5.3b.1 | |||||||
F20C5.3c.1 | |||||||
F20C5.3d.1 | |||||||
Associated_feature | WBsf652012 | ||||||
WBsf668123 | |||||||
WBsf230464 | |||||||
WBsf230465 | |||||||
Experimental_info | RNAi_result | WBRNAi00013606 | Inferred_automatically | RNAi_primary | |||
WBRNAi00045088 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00110548 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031161 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00110547 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00061538 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr13273 | ||||||
Expr13274 | |||||||
Expr1028932 | |||||||
Expr1033902 | |||||||
Expr1149037 | |||||||
Expr2011277 | |||||||
Expr2029513 | |||||||
Drives_construct | WBCnstr00032560 | ||||||
Construct_product | WBCnstr00032560 | ||||||
Regulate_expr_cluster | WBPaper00050743:elli-1(sam-3)_downregulated | ||||||
WBPaper00050743:elli-1(sam-3)_upregulated | |||||||
Microarray_results (23) | |||||||
Expression_cluster (124) | |||||||
Interaction (21) | |||||||
Map_info | Map | IV | Position | 3.96004 | |||
Positive | Positive_clone | F20C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00050743 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |