WormBase Tree Display for Gene: WBGene00008891
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| WBGene00008891 | SMap | S_parent | Sequence | F16H6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-42 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F16H6.1 | ||||||||
| Molecular_name | F16H6.1 | ||||||||
| F16H6.1.1 | |||||||||
| CE18597 | |||||||||
| Other_name | CELE_F16H6.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-42 | ||||||||
| DB_info | Database | AceView | gene | 5S673 | |||||
| WormQTL | gene | WBGene00008891 | |||||||
| WormFlux | gene | WBGene00008891 | |||||||
| NDB | locus_tag | CELE_F16H6.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008891|UniProtKB=Q9XV91 | |||||||
| family | PTHR22991 | ||||||||
| NCBI | gene | 180189 | |||||||
| RefSeq | protein | NM_075156.4 | |||||||
| TREEFAM | TREEFAM_ID | TF351663 | |||||||
| TrEMBL | UniProtAcc | Q9XV91 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XV91 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Apr 2005 13:53:46 | WBPerson2970 | Name_change | CGC_name | clec-42 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele | WBVar00056159 | ||||||||
| WBVar00056164 | |||||||||
| WBVar00091255 | |||||||||
| WBVar00056169 | |||||||||
| WBVar01492530 | |||||||||
| WBVar01499709 | |||||||||
| WBVar01875353 | |||||||||
| WBVar01875354 | |||||||||
| WBVar01875355 | |||||||||
| WBVar01875356 | |||||||||
| WBVar01897206 | |||||||||
| WBVar01897207 | |||||||||
| WBVar01689870 | |||||||||
| WBVar01465097 | |||||||||
| WBVar01465098 | |||||||||
| WBVar01499566 | |||||||||
| WBVar01998594 | |||||||||
| WBVar00091142 | |||||||||
| WBVar01822171 | |||||||||
| WBVar01822172 | |||||||||
| WBVar01091767 | |||||||||
| WBVar01091768 | |||||||||
| WBVar01091769 | |||||||||
| WBVar01091770 | |||||||||
| WBVar01091771 | |||||||||
| WBVar01091772 | |||||||||
| WBVar01091773 | |||||||||
| WBVar01091774 | |||||||||
| WBVar01091775 | |||||||||
| WBVar01091776 | |||||||||
| WBVar01091777 | |||||||||
| WBVar01091778 | |||||||||
| WBVar01091779 | |||||||||
| WBVar01091780 | |||||||||
| WBVar01091781 | |||||||||
| WBVar01091782 | |||||||||
| WBVar01091783 | |||||||||
| WBVar02122168 | |||||||||
| WBVar01749392 | |||||||||
| WBVar01749393 | |||||||||
| WBVar02125182 | |||||||||
| WBVar02121809 | |||||||||
| WBVar01654701 | |||||||||
| WBVar01654702 | |||||||||
| WBVar01845787 | |||||||||
| WBVar01845788 | |||||||||
| WBVar01499446 | |||||||||
| WBVar01654703 | |||||||||
| WBVar01845789 | |||||||||
| WBVar01654704 | |||||||||
| WBVar01845790 | |||||||||
| WBVar02123859 | |||||||||
| WBVar01498549 | |||||||||
| WBVar02123315 | |||||||||
| WBVar02121660 | |||||||||
| WBVar02124974 | |||||||||
| WBVar01499299 | |||||||||
| WBVar02124434 | |||||||||
| WBVar01638003 | |||||||||
| WBVar02121311 | |||||||||
| WBVar01638004 | |||||||||
| WBVar01991935 | |||||||||
| WBVar01638005 | |||||||||
| WBVar01638006 | |||||||||
| WBVar01638007 | |||||||||
| WBVar01638008 | |||||||||
| WBVar01638009 | |||||||||
| WBVar01638010 | |||||||||
| WBVar01909159 | |||||||||
| WBVar01638011 | |||||||||
| WBVar00485141 | |||||||||
| WBVar02123536 | |||||||||
| WBVar01498957 | |||||||||
| WBVar00485142 | |||||||||
| WBVar00485143 | |||||||||
| WBVar02124275 | |||||||||
| WBVar00485144 | |||||||||
| WBVar00056154 | |||||||||
| WBVar00485145 | |||||||||
| WBVar00485146 | |||||||||
| WBVar00485147 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (78) | |||||||||
| Paralog (52) | |||||||||
| Structured_description | Automated_description | Expressed in int1DL; int1DR; int1VL; int1VR; and neurons. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16H6.1 | |||||||
| Corresponding_transcript | F16H6.1.1 | ||||||||
| Associated_feature | WBsf647675 | ||||||||
| WBsf1002843 | |||||||||
| WBsf1021424 | |||||||||
| WBsf233158 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031048 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00115655 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044829 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013428 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3375 | ||||||||
| Expr15813 | |||||||||
| Expr15814 | |||||||||
| Expr1021726 | |||||||||
| Expr1148794 | |||||||||
| Expr2010175 | |||||||||
| Expr2028417 | |||||||||
| Drives_construct | WBCnstr00011372 | ||||||||
| WBCnstr00032613 | |||||||||
| WBCnstr00042533 | |||||||||
| Construct_product | WBCnstr00032613 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (224) | |||||||||
| Interaction (43) | |||||||||
| Map_info | Map | V | Position | 14.7815 | Error | 0.044228 | |||
| Positive | Positive_clone | F16H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026629 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00057576 | |||||||||
| WBPaper00061178 | |||||||||
| WBPaper00061236 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
