WormBase Tree Display for Gene: WBGene00008881
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| WBGene00008881 | SMap | S_parent | Sequence | F16B12 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | F16B12.5 | ||||||||
| Molecular_name | F16B12.5 | |||||||||
| Other_name | CELE_F16B12.5 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | F16B12.5 | |||||||||
| DB_info | Database | AceView | gene | XO717 | ||||||
| WormQTL | gene | WBGene00008881 | ||||||||
| SignaLink | protein | WBGene00008881 | ||||||||
| WormFlux | gene | WBGene00008881 | ||||||||
| NDB | locus_tag | CELE_F16B12.5 | ||||||||
| NCBI | gene | 184565 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 20 May 2019 14:52:51 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (52) | ||||||||||
| Strain | WBStrain00037118 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00029382 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| Inparanoid_8 | ||||||||||
| WBGene00163398 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
| WBGene00029384 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||||||
| WBGene00066950 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| WBGene00066949 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| Structured_description | Automated_description | Enriched in ABalpapaap; ABarappaap; and IL socket cell based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and eat-2 based on tiling array; RNA-seq; and microarray studies. Is affected by four chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F16B12.5:wp196 | ||||||||
| F16B12.5:wp267 | ||||||||||
| F16B12.5:wp271 | ||||||||||
| Corresponding_pseudogene | F16B12.5 | |||||||||
| Experimental_info | Expr_pattern | Expr1015082 | ||||||||
| Expr1148742 | ||||||||||
| Expr2002643 | ||||||||||
| Expr2020860 | ||||||||||
| Microarray_results (17) | ||||||||||
| Expression_cluster (29) | ||||||||||
| Interaction (22) | ||||||||||
| Map_info | Positive | Positive_clone | F16B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | X | 16.4664 | ||||||||
| Reference | WBPaper00027258 | |||||||||
| Method | Gene |
