Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00008772

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00008772SMapS_parentSequenceF13G11
IdentityVersion2
NameCGC_nameirld-4Person_evidenceWBPerson260
Sequence_nameF13G11.2
Molecular_nameF13G11.2
F13G11.2.1
CE19790
Other_nameCELE_F13G11.2Accession_evidenceNDBBX284604
Public_nameirld-4
DB_infoDatabaseAceViewgene4P397
WormQTLgeneWBGene00008772
WormFluxgeneWBGene00008772
NDBlocus_tagCELE_F13G11.2
PanthergeneCAEEL|WormBase=WBGene00008772|UniProtKB=Q9XU44
familyPTHR21662
NCBIgene184432
RefSeqproteinNM_070371.2
TREEFAMTREEFAM_IDTF318379
TrEMBLUniProtAccQ9XU44
UniProt_GCRPUniProtAccQ9XU44
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
225 May 2012 15:57:08WBPerson2970Name_changeCGC_nameirld-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classirld
Allele (33)
RNASeq_FPKM (74)
GO_annotation00101489
Ortholog (31)
Paralog (66)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF13G11.2
Corresponding_transcriptF13G11.2.1
Other_sequenceCJC06927_1
Associated_featureWBsf229515
Experimental_infoRNAi_resultWBRNAi00013237Inferred_automaticallyRNAi_primary
WBRNAi00044532Inferred_automaticallyRNAi_primary
Expr_patternExpr1016620
Expr1148484
Expr2012852
Expr2031087
Drives_constructWBCnstr00032701
Construct_productWBCnstr00032701
Microarray_results (15)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00031070:rrf-3_eri-1_upregulated
WBPaper00033065:isp-1-1(qm150)_downregulated
WBPaper00033070:Elbe_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044037:eat-2_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044736:rising_dev_expression
WBPaper00045521:Spermatogenic
WBPaper00045809:rsd-2(yp10)_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:csr-1(RNAi)_upregulated_Set2
WBPaper00046805:P-granule-RNAi_upregulated_Set1
WBPaper00050231:male_enriched
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050522:mafr-1(tm6082)_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053599:female_vs_male_downregulated
WBPaper00053657:JU2519_M.humicola-infection_24hr
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055226:adr-1(tm668)_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056161:male_enriched_siRNA
WBPaper00056167:Cry5B_downregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00057068:numr-1(RNAi)_upregulated
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059117:B.subtilis_upregulated
WBPaper00059567:olrn-1(ums9)_regulated
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:Y40H4A.2-ZK1053.2
WBPaper00061572:oleic-acid-specific_mating_upregulated
WBPaper00062078:NMR-HspB1_regulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
WBPaper00064494:postdauer_downregulated_WholeAnimal
WBPaper00064505:tamoxifen_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066093:E.coli-purE_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_11
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00030985:Photorhabdus_luminescens_upregulated
WBPaper00030985:Serratia_marcesens_downregulated
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00031184:acrylamide_upregulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036286:Pattern_E
WBPaper00037113:CPF_16C_down-regulated
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00038172:tax-6null_down_regulated
WBPaper00040963:Q200_up
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045673:colistin_downregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_D
[cgc6390]:spermatogenesis-enriched
Interaction (152)
Map_infoMapIVPosition12.2802
PositivePositive_cloneF13G11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene